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cn_combo_scaffold_242

Alias: MIC18_2

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Displaying items 1-30 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_242_1
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1..399
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Microbacterium sp. 292MF RepID=UPI000381CC34
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
rpsH; 30S ribosomal protein S8
cn_combo_scaffold_242_2
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


406..942
DNA (537bp) protein (179aa)
50S ribosomal protein L6 n=1 Tax=Microbacterium sp. B19 RepID=UPI0003470244
rplF; 50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="M
cn_combo_scaffold_242_3
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


945..1304
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF19_MICTS
rplR; 50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
cn_combo_scaffold_242_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


1301..1990
DNA (690bp) protein (230aa)
30S ribosomal protein S5 n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BCS8_9MICO
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
rpsE; 30S ribosomal protein S5
cn_combo_scaffold_242_5
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


1990..2175
DNA (186bp) protein (62aa)
50S ribosomal protein L30 n=1 Tax=Microbacterium sp. 11MF RepID=UPI0003776816
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="
rpmD; ribosomal protein L30/L7E
cn_combo_scaffold_242_6
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2175..2744
DNA (570bp) protein (190aa)
50S ribosomal protein L15 n=1 Tax=Microbacterium sp. 292MF RepID=UPI000363B1C7
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="
rplO; ribosomal protein L15
cn_combo_scaffold_242_7
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2887..4209
DNA (1323bp) protein (441aa)
preprotein translocase subunit SecY n=1 Tax=Microbacterium yannicii RepID=UPI0002D9D368
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;"
secY; preprotein translocase subunit SecY
cn_combo_scaffold_242_8
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4206..4796
DNA (591bp) protein (197aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adenylate kinase n=1 Tax=Microbacterium yannicii RepID=UPI000309F909
adenylate kinase
cn_combo_scaffold_242_9
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4799..5638
DNA (840bp) protein (280aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
methionine aminopeptidase n=1 Tax=Microbacterium yannicii RepID=UPI0003009545
map; methionine aminopeptidase
cn_combo_scaffold_242_10
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5680..6363
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XB75_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAD34971.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
protein-disulfide isomerase
cn_combo_scaffold_242_11
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6515..6736
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 n=2 Tax=Microbacterium RepID=H8E501_9MICO
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis
infA; translation initiation factor 1 (IF-1)
cn_combo_scaffold_242_12
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6804..6920
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=3 Tax=Microbacterium RepID=H8E500_9MICO
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
rpmJ; 50S ribosomal protein L36
cn_combo_scaffold_242_13
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


7158..7532
DNA (375bp) protein (125aa)
30S ribosomal protein S13 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF10_MICTS
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strai
cn_combo_scaffold_242_14
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


7564..7962
DNA (399bp) protein (133aa)
30S ribosomal protein S11 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF09_MICTS
rpsK; 30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strai
cn_combo_scaffold_242_15
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8101..9090
DNA (990bp) protein (330aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=1 Tax=Microbacterium yannicii RepID=UPI0002E3FEAD
rpoA; DNA-directed RNA polymerase, alpha subunit/40 kD subunit
cn_combo_scaffold_242_16
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


9137..9706
DNA (570bp) protein (190aa)
50S ribosomal protein L17 n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CBA90
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
rplQ; ribosomal protein L17
cn_combo_scaffold_242_17
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9779..10735
DNA (957bp) protein (319aa)
Putative cetyltransferase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XQ30_9MICO
Putative cetyltransferase {ECO:0000313|EMBL:GAD34977.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
acetyltransferase
cn_combo_scaffold_242_18
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10764..12707)
DNA (1944bp) protein (648aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000378F811
Putative acyltransferase {ECO:0000313|EMBL:GAD34978.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
yrhL; lipopolysaccharide modification acyltransferase
cn_combo_scaffold_242_19
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12848..13708
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E33710
UspA domain-containing protein {ECO:0000313|EMBL:EZP29016.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
UspA domain-containing protein
cn_combo_scaffold_242_20
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13752..14369
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003749E7B
Uncharacterized protein {ECO:0000313|EMBL:KEP75301.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
cn_combo_scaffold_242_21
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14347..15519)
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037C894B
GGDEF domain
FOG: GGDEF domain {ECO:0000313|EMBL:BAJ73855.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;
cn_combo_scaffold_242_22
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15516..17156)
DNA (1641bp) protein (547aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" sour
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003677E04
signal transduction histidine kinase
cn_combo_scaffold_242_23
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17276..18757
DNA (1482bp) protein (494aa)
Glycosyltransferase, probably n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NEI5_MICTS
glycosyltransferase, probably
Glycosyltransferase, probably {ECO:0000313|EMBL:BAJ73851.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strai
cn_combo_scaffold_242_24
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18784..19764)
DNA (981bp) protein (327aa)
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NEI4_MICTS
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:BAJ73850.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microba
cn_combo_scaffold_242_25
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19934..20950)
DNA (1017bp) protein (339aa)
Glucanase {ECO:0000256|RuleBase:RU361186}; EC=3.2.1.- {ECO:0000256|RuleBase:RU361186};; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Mic
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035C56AC
cellobiohydrolase A
cn_combo_scaffold_242_26
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20989..21828
DNA (840bp) protein (280aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003704420
truA; pseudouridylate synthase
cn_combo_scaffold_242_27
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21918..22640
DNA (723bp) protein (241aa)
exonuclease n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003653363
exonuclease III
Exonuclease III {ECO:0000313|EMBL:BAJ73859.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
cn_combo_scaffold_242_28
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22810..24717)
DNA (1908bp) protein (636aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00037D4D34
Putative peptide amidase {ECO:0000313|EMBL:ERK73359.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATC
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit rbh
cn_combo_scaffold_242_29
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24714..25472)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00037C10B9
hypothetical protein
Predicted membrane protein {ECO:0000313|EMBL:BAJ73159.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain S
cn_combo_scaffold_242_30
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25850..26305
DNA (456bp) protein (152aa)
VanZ family protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4T5_9MICO
VanZ family protein {ECO:0000313|EMBL:EIC07874.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
VanZ family protein
Displaying items 1-30 of 119 in total

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