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cn_combo_scaffold_408

Alias: MIC18_5

Search features with annotation key words

Displaying items 1-30 of 117 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_408_1
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..209)
DNA (207bp) protein (69aa)
Putative glutamate--cysteine ligase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=314
carboxylate-amine ligase (EC:6.3.-.-)
Carboxylate-amine ligase RB2654_02359 n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VDD0_9RHOB
cn_combo_scaffold_408_2
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(211..789)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003775D78
Contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIU02845.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
hypothetical protein
cn_combo_scaffold_408_3
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(850..1104)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000312FF4E
Type IV secretion protein Rhs {ECO:0000313|EMBL:EXJ51694.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Rhs family protein
cn_combo_scaffold_408_4
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1147..1608
DNA (462bp) protein (154aa)
Regulatory protein MarR n=2 Tax=Microbacterium RepID=H8E2R5_9MICO
Regulatory protein MarR {ECO:0000313|EMBL:EIC08795.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.
transcriptional regulator
cn_combo_scaffold_408_5
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1671..3116)
DNA (1446bp) protein (482aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
amidophosphoribosyltransferase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003617E04
purF; glutamine phosphoribosylpyrophosphate amidotransferase
cn_combo_scaffold_408_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3162..4214)
DNA (1053bp) protein (351aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
phosphoribosylaminoimidazole synthetase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036D2AF8
purM; phosphoribosylaminoimidazole (AIR) synthetase
cn_combo_scaffold_408_7
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4384..4995
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037FBDE1
Zn-dependent alcohol dehydrogenase {ECO:0000313|EMBL:GAD34344.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;
Zn-dependent alcohol dehydrogenase
cn_combo_scaffold_408_8
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5009..5377)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000303D015
Trk-type K+ transport system, membrane component {ECO:0000313|EMBL:KIC58037.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacteri
Trk-type K+ transport systems, membrane components
cn_combo_scaffold_408_9
unknown

Not on your lists

comp(5385..5897)
DNA (513bp) protein (171aa)

This feature has no annotations

cn_combo_scaffold_408_10
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5978..6334)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B6BE99
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ74148.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB
cn_combo_scaffold_408_11
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6382..7653
DNA (1272bp) protein (424aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
phosphoribosylamine--glycine ligase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000381BE09
purD; phosphoribosylamine-glycine ligase
cn_combo_scaffold_408_12
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(7669..8016)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI000360F7DC
hypothetical protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
cn_combo_scaffold_408_13
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8013..8375)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F625CB
Inner membrane protein YidH {ECO:0000313|EMBL:KJL26410.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
cn_combo_scaffold_408_14
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8425..9372
DNA (948bp) protein (316aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Microbacterium yannicii RepID=UPI0002F697D9
purC; phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
cn_combo_scaffold_408_15
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9394..10410)
DNA (1017bp) protein (339aa)
LacI family transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI000375F7D1
HTH-type transcriptional regulator CelR {ECO:0000313|EMBL:CDK01327.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C
transcriptional regulator
cn_combo_scaffold_408_16
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10442..11908)
DNA (1467bp) protein (489aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" sou
beta-glucosidase n=1 Tax=Microbacterium yannicii RepID=UPI0002E00C98
beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
cn_combo_scaffold_408_17
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11978..12892)
DNA (915bp) protein (305aa)
Sugar ABC transporter permease protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XMR1_9MICO
Sugar ABC transporter permease protein {ECO:0000313|EMBL:GAD34360.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS
sugar ABC transporter permease
cn_combo_scaffold_408_18
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12889..13941)
DNA (1053bp) protein (351aa)
Sugar ABC transporter permease protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XA27_9MICO
Sugar ABC transporter permease protein {ECO:0000313|EMBL:GAD34361.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS
sugar ABC transporter permease
cn_combo_scaffold_408_19
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14017..15291)
DNA (1275bp) protein (425aa)
DNA, contig: MspTS1nb01 n=1 Tax=Microbacterium sp. TS-1 RepID=U2XN75_9MICO
DNA, contig: MspTS1nb01 {ECO:0000313|EMBL:GAD34362.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
sugar ABC transporter periplasmic protein
cn_combo_scaffold_408_20
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15573..15821
DNA (249bp) protein (83aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formyl
Phosphoribosylformylglycinamidine synthase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KMS8_9MICO
phosphoribosylformylglycinamidine (FGAM) synthase, PurS component
cn_combo_scaffold_408_21
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15818..16522
DNA (705bp) protein (235aa)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:000025
phosphoribosylformylglycinamidine synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036B1100
purQ; phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain
cn_combo_scaffold_408_22
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16543..17493
DNA (951bp) protein (317aa)
Glyoxylate/hydroxypyruvate reductase B {ECO:0000313|EMBL:KJL36059.1}; EC=1.1.1.79 {ECO:0000313|EMBL:KJL36059.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Micr
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003730EB4
phosphoglycerate dehydrogenase
cn_combo_scaffold_408_23
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17503..18048)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000346E79E
Uncharacterized protein {ECO:0000313|EMBL:EXJ51044.1}; Flags: Fragment;; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp.
hypothetical protein
cn_combo_scaffold_408_24
Kocuria marina, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18194..18943)
DNA (750bp) protein (250aa)
MerR family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B46258
Uncharacterized protein {ECO:0000313|EMBL:KHE74050.1}; TaxID=223184 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria marina.;"
MerR family transcriptional regulator
cn_combo_scaffold_408_25
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19099..19365)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000370149A
Uncharacterized protein {ECO:0000313|EMBL:CDJ99447.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
cn_combo_scaffold_408_26
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19542..20306
DNA (765bp) protein (255aa)
Purine or other phosphorylase family 1 {ECO:0000313|EMBL:CDK01337.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C4
Purine or other phosphorylase family 1 id=7720782 bin=CNBR_ACT species=Clostridium saccharolyticum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACT organism_group=Actinobacteria
purine or other phosphorylase family 1
cn_combo_scaffold_408_27
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20390..21607
DNA (1218bp) protein (406aa)
HNH endonuclease n=2 Tax=Microbacterium RepID=H8E4U4_9MICO
HNH endonuclease {ECO:0000313|EMBL:EXJ52113.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
cn_combo_scaffold_408_28
unknown

Not on your lists

comp(21857..22426)
DNA (570bp) protein (190aa)

This feature has no annotations

cn_combo_scaffold_408_29
Gordonia sp. NB4-1Y, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22609..23436
DNA (828bp) protein (276aa)
FAD binding domain in molybdopterin dehydrogenase family protein n=1 Tax=Gordonia sp. NB4-1Y RepID=M7A075_9ACTO
FAD binding domain in molybdopterin dehydrogenase family protein {ECO:0000313|EMBL:EMP12073.1}; TaxID=1241906 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Go
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
cn_combo_scaffold_408_30
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23433..26240
DNA (2808bp) protein (936aa)
Xanthine dehydrogenase molybdenum-binding subunit {ECO:0000313|EMBL:KJL36048.1}; EC=1.17.1.4 {ECO:0000313|EMBL:KJL36048.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteri
Aerobic-type carbon monoxide dehydrogenase large subunit n=1 Tax=Microbacterium sp. TS-1 RepID=U2YMS5_9MICO
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Displaying items 1-30 of 117 in total

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