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cn_combo_scaffold_894

Alias: MIC18_15

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Displaying items 61-88 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_894_trna_3
unknown

Not on your lists

55250..55322
DNA (73bp)
transferRNA
cn_combo_scaffold_894_57
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

55360..55713
DNA (354bp) protein (118aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NDK0_MICTS
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:BAJ76266.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium
cn_combo_scaffold_894_58
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

55710..56015
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000360B8C3
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbact
hypothetical protein
cn_combo_scaffold_894_59
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

56008..56511
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000368D923
Uncharacterized protein {ECO:0000313|EMBL:KJL35277.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
cn_combo_scaffold_894_60
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(56516..57028)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E114EE
Uncharacterized protein {ECO:0000313|EMBL:KJQ52920.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
adenylate kinase
cn_combo_scaffold_894_61
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(57084..57404)
DNA (321bp) protein (107aa)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NDJ6_MICTS
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs {ECO:0000313|EMBL:BAJ76262.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacte
cn_combo_scaffold_894_62
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(57444..58709)
DNA (1266bp) protein (422aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=979556 species="Bacteria; Actinobacteria; Mic
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035C5F47
nucleotidyltransferase/DNA polymerase
cn_combo_scaffold_894_63
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(58769..60298)
DNA (1530bp) protein (510aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.-
aspartyl/glutamyl-tRNA amidotransferase subunit B n=1 Tax=Microbacterium RepID=UPI0003743A44
gatB; Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit
cn_combo_scaffold_894_64
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(60298..61821)
DNA (1524bp) protein (508aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=145126
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ALP7_9MICO
gatA; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
cn_combo_scaffold_894_65
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(61830..62129)
DNA (300bp) protein (100aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
aspartyl/glutamyl-tRNA amidotransferase subunit C n=1 Tax=Microbacterium RepID=UPI000369F2B9
Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit
cn_combo_scaffold_894_66
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

62186..63898
DNA (1713bp) protein (571aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:KJL35871.1}; EC=6.2.1.3 {ECO:0000313|EMBL:KJL35871.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacte
long-chain fatty acid--CoA ligase n=1 Tax=Microbacterium yannicii RepID=UPI0002F25372
fadD; acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
cn_combo_scaffold_894_67
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(63920..66187)
DNA (2268bp) protein (756aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1451261 species="Bacteri
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2)
DNA ligase n=2 Tax=Clavibacter michiganensis subsp. michiganensis RepID=DNLJ_CLAM3
cn_combo_scaffold_894_68
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(66264..67337)
DNA (1074bp) protein (358aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; M
thiouridylase n=1 Tax=Microbacterium paraoxydans RepID=UPI0003801BDC
mnmA; tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
cn_combo_scaffold_894_69
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(67365..68552)
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000371F864
cysteine sulfinate desulfinase/cysteine desulfurase
Cysteine sulfinate desulfinase/cysteine desulfurase {ECO:0000313|EMBL:BAJ76253.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbact
cn_combo_scaffold_894_70
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

68612..70699
DNA (2088bp) protein (696aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Mic
glycosyl hydrolase n=1 Tax=Microbacterium yannicii RepID=UPI00030BE599
type II secretory pathway, pullulanase PulA
cn_combo_scaffold_894_71
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

70750..72834
DNA (2085bp) protein (695aa)
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; Short=GMPMT {ECO:0000256|HAMAP-Rule:MF_02124};; EC=2.4.99.16 {ECO:0000256|HAMAP-Rule:MF_02124};; (1->4)-alph
alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase n=1 Tax=Microbacterium yannicii RepID=UPI000309D5ED
glycosidase
cn_combo_scaffold_894_72
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

72831..74990
DNA (2160bp) protein (720aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMA
glycogen branching protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003721D82
1,4-alpha-glucan branching enzyme
cn_combo_scaffold_894_73
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(75063..75998)
DNA (936bp) protein (312aa)
thioredoxin n=1 Tax=Microbacterium sp. B19 RepID=UPI00034934FD
thioredoxin domain-containing protein
Thioredoxin domain-containing protein {ECO:0000313|EMBL:BAJ76249.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceu
cn_combo_scaffold_894_74
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(75995..77890)
DNA (1896bp) protein (632aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D44DEE
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:BAJ76248.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037)
cn_combo_scaffold_894_75
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

78038..79102
DNA (1065bp) protein (355aa)
permease n=1 Tax=Microbacterium yannicii RepID=UPI0002F8054F
Contig_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIP95472.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. M
permease
cn_combo_scaffold_894_76
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(79104..79823)
DNA (720bp) protein (240aa)
alpha/beta hydrolase n=1 Tax=Microbacterium yannicii RepID=UPI000311F26D
hydrolase of the alpha/beta superfamily
Predicted hydrolase of the alpha/beta superfamily {ECO:0000313|EMBL:BAJ76246.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacter
cn_combo_scaffold_894_77
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(79825..80112)
DNA (288bp) protein (96aa)
ATP/GTP-binding protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D4576
ATP/GTP-binding protein {ECO:0000313|EMBL:GAD33056.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
ATP/GTP-binding protein
cn_combo_scaffold_894_78
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(80117..80782)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003823117
Uncharacterized protein {ECO:0000313|EMBL:KIC56179.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
secreted protein
cn_combo_scaffold_894_79
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(80926..81480)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000382408D
permease of the major facilitator superfamily
Permease of the major facilitator superfamily {ECO:0000313|EMBL:BAJ76243.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium
cn_combo_scaffold_894_80
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(81477..82517)
DNA (1041bp) protein (347aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Mic
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F210F3
CDP-diglyceride synthetase
cn_combo_scaffold_894_81
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(82526..83080)
DNA (555bp) protein (185aa)
ribosome recycling factor n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036CB652
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1451261 species="Bacteria;
frr; ribosome recycling factor
cn_combo_scaffold_894_82
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(83129..83848)
DNA (720bp) protein (240aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
uridylate kinase n=1 Tax=Microbacterium yannicii RepID=UPI0002F7E205
pyrH; uridylate kinase
cn_combo_scaffold_894_83
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(83927..84754)
DNA (828bp) protein (276aa)
elongation factor Ts n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035E436B
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacteriu
tsf; translation elongation factor Ts
Displaying items 61-88 of 88 in total

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