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cn_combo_scaffold_894

Alias: MIC18_15

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Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_894_1
Gordonia paraffinivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..602
DNA (600bp) protein (200aa)
Putative transposase n=1 Tax=Gordonia paraffinivorans NBRC 108238 RepID=M3VGV6_9ACTO
Putative transposase {ECO:0000313|EMBL:GAC86328.1}; TaxID=1223543 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia paraffinivorans NBRC 108238.;"
Integrase catalytic region
cn_combo_scaffold_894_2
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1261..2571)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=2 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A4M2_9MICO
Transposase {ECO:0000313|EMBL:EXJ50645.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
transposase of ISAar42, ISL3 family
cn_combo_scaffold_894_3
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2629..2973)
DNA (345bp) protein (115aa)
transposase n=1 Tax=Mycobacterium intracellulare RepID=UPI0001B45F6D
Transposase {ECO:0000313|EMBL:EXJ50653.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
transposase
cn_combo_scaffold_894_4
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3030..3377
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A378_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83156.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 st
transposase-truncated
cn_combo_scaffold_894_5
unknown

Not on your lists

comp(3488..4360)
DNA (873bp) protein (291aa)

This feature has no annotations

cn_combo_scaffold_894_6
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4353..4583)
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:KGJ73478.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
cn_combo_scaffold_894_7
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5019..6287)
DNA (1269bp) protein (423aa)
Phage-related integrase n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V135_9ACTO
Integrase {ECO:0000313|EMBL:KGM10926.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
integrase family protein
cn_combo_scaffold_894_8
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6284..6517)
DNA (234bp) protein (78aa)
Putative DNA binding domain, excisionase family n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V136_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH75162.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
cn_combo_scaffold_894_trna_5
unknown

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comp(6678..6750)
DNA (73bp)
transferRNA
cn_combo_scaffold_894_9
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6822..7199)
DNA (378bp) protein (126aa)
iojap family protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F6C0D7
hypothetical protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum
cn_combo_scaffold_894_10
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7196..8290)
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F6B06C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ76324.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB
cn_combo_scaffold_894_11
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8287..8850)
DNA (564bp) protein (188aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244};
nicotinic acid mononucleotide adenylyltransferase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003800C50
nadD; nicotinic acid mononucleotide adenylyltransferase
cn_combo_scaffold_894_12
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8893..9114)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037CFF16
4-hydroxybenzoate polyprenyltransferase {ECO:0000313|EMBL:KIC56075.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium homini
4-hydroxybenzoate polyprenyltransferase
cn_combo_scaffold_894_13
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9171..10430)
DNA (1260bp) protein (420aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:000
gamma-glutamyl phosphate reductase n=1 Tax=Microbacterium sp. 11MF RepID=UPI00037FB74B
proA; gamma-glutamyl phosphate reductase
cn_combo_scaffold_894_14
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10427..11266)
DNA (840bp) protein (280aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|H
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003000FE5
proB; glutamate 5-kinase
cn_combo_scaffold_894_15
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(11263..12774)
DNA (1512bp) protein (504aa)
GTPase CgtA n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003633554
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" sourc
obgE; GTPase
cn_combo_scaffold_894_16
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(12881..13138)
DNA (258bp) protein (86aa)
50S ribosomal protein L27 n=2 Tax=Microbacterium RepID=H8E845_9MICO
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
rpmA; ribosomal protein L27
cn_combo_scaffold_894_17
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(13157..13465)
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Microbacterium sp. TS-1 RepID=U2XIB7_9MICO
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
rplU; ribosomal protein L21
cn_combo_scaffold_894_18
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13682..13954
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003029BF2
Uncharacterized protein {ECO:0000313|EMBL:KIC56081.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
cn_combo_scaffold_894_19
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13957..16305)
DNA (2349bp) protein (783aa)
ribonuclease G n=1 Tax=Microbacterium yannicii RepID=UPI000381E181
rng; ribonuclease G and E
Ribonuclease G and E {ECO:0000313|EMBL:BAJ76315.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037
cn_combo_scaffold_894_20
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16636..17250
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000375AD29
Putative integral membrane protein {ECO:0000313|EMBL:CDJ99852.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;
hypothetical protein
cn_combo_scaffold_894_21
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17257..17673)
DNA (417bp) protein (139aa)
Nucleoside diphosphate kinase {ECO:0000256|RuleBase:RU004013}; EC=2.7.4.6 {ECO:0000256|RuleBase:RU004013};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacter
nucleoside diphosphate kinase n=1 Tax=Microbacterium yannicii RepID=UPI0003043F16
ndk; nucleoside diphosphate kinase
cn_combo_scaffold_894_22
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17670..18092)
DNA (423bp) protein (141aa)
Allophanate hydrolase subunit 2 n=1 Tax=Microbacterium sp. TS-1 RepID=U2XIC1_9MICO
Allophanate hydrolase subunit 2 {ECO:0000313|EMBL:GAD32980.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
allophanate hydrolase subunit 2
cn_combo_scaffold_894_23
Microbacterium arborescens, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18082..19437)
DNA (1356bp) protein (452aa)
Putative folylpolyglutamate synthase n=1 Tax=Microbacterium arborescens RepID=Q1X6P2_9MICO
Putative folylpolyglutamate synthase {ECO:0000313|EMBL:AAZ06832.1}; TaxID=33883 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium arborescen
folylpolyglutamate synthase
cn_combo_scaffold_894_24
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19434..22817)
DNA (3384bp) protein (1128aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
isoleucyl-tRNA synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037F937E
ileS; isoleucyl-tRNA synthetase
cn_combo_scaffold_894_25
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23017..23229)
DNA (213bp) protein (71aa)
N-acetyltransferase GCN5 n=1 Tax=Microbacterium sp. TS-1 RepID=U2YJ74_9MICO
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDJ99858.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
N-acetyltransferase GCN5
cn_combo_scaffold_894_26
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23266..23604)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI0003664DD2
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDJ99858.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
cn_combo_scaffold_894_27
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


23682..26261
DNA (2580bp) protein (860aa)
Valine--tRNA ligase {ECO:0000256|SAAS:SAAS00105779}; EC=6.1.1.9 {ECO:0000256|SAAS:SAAS00105779};; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" s
Valine--tRNA ligase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YJ79_9MICO
valS; valyl-tRNA synthetase
cn_combo_scaffold_894_28
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26263..26511
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F9D40D
Fe-S osidoreductase {ECO:0000313|EMBL:KIC56091.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Fe-S oxidoreductase
cn_combo_scaffold_894_29
unknown

Not on your lists

comp(26520..26726)
DNA (207bp) protein (69aa)

This feature has no annotations

Displaying items 1-30 of 88 in total

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