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cn_combo_scaffold_1769

Alias: MIC18_47

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1769_1
uncultured Caldicellulosiruptor sp., Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(27..698)
DNA (672bp) protein (224aa)
Putative endo-beta-1,3-glucanase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I5F3_CALAS
SKN1 {ECO:0000313|EMBL:AIA93357.1}; Flags: Fragment;; TaxID=569407 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosir
putative endo-beta-1,3-glucanase
cn_combo_scaffold_1769_2
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

812..2386
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00030F04FD
sulfite oxidase
Sulfite oxidase {ECO:0000313|EMBL:BAJ74934.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
cn_combo_scaffold_1769_3
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2426..3352)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035F6ADE
Alpha/beta hydrolase {ECO:0000313|EMBL:EXJ50725.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hydrolase or acyltransferase
cn_combo_scaffold_1769_4
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3337..4086)
DNA (750bp) protein (250aa)
bdhA; 3-hydroxybutyrate dehydrogenase (EC:1.1.1.30)
3-hydroxybutyrate dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036C4645
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:KDA05780.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
cn_combo_scaffold_1769_5
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4083..4757)
DNA (675bp) protein (225aa)
Regulatory protein TetR n=2 Tax=Microbacterium RepID=H8E473_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84305.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 st
TetR family transcriptional regulator
cn_combo_scaffold_1769_6
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4744..6297)
DNA (1554bp) protein (518aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003821B8C
Uncharacterized protein {ECO:0000313|EMBL:EPD84304.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 st
AMP-dependent synthetase and ligase
cn_combo_scaffold_1769_7
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6294..7427)
DNA (1134bp) protein (378aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E471_9MICO
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EIC08120.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacteri
inner-membrane translocator
cn_combo_scaffold_1769_8
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7424..8299)
DNA (876bp) protein (292aa)
ABC transporter permease n=1 Tax=Microbacterium sp. 292MF RepID=UPI000379E7E7
ABC transporter permease {ECO:0000313|EMBL:KIC57669.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
inner-membrane translocator
cn_combo_scaffold_1769_9
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8296..9015)
DNA (720bp) protein (240aa)
branched-chain amino acid ABC transporter ATPase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037414F8
Branched-chain amino acid ABC transporter ATPase {ECO:0000313|EMBL:KIC57670.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacteri
ABC-type branched-chain amino acid transport systems ATPase component
cn_combo_scaffold_1769_10
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9012..9776)
DNA (765bp) protein (255aa)
ABC transporter related protein n=2 Tax=Microbacterium RepID=H8E468_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84300.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 st
ABC transporter-like protein
cn_combo_scaffold_1769_11
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9800..10999)
DNA (1200bp) protein (400aa)
amino acid ABC transporter substrate-binding protein n=1 Tax=Microbacterium yannicii RepID=UPI000319ADC1
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EIC08116.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Mic
ABC branched-chain amino acid transporter substrate-binding protein
cn_combo_scaffold_1769_12
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11156..12379)
DNA (1224bp) protein (408aa)
Ornithine aminotransferase {ECO:0000313|EMBL:CDJ99915.1}; EC=2.6.1.13 {ECO:0000313|EMBL:CDJ99915.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.
Ornithine-oxo-acid transaminase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B7V6_9MICO
rocD1; ornithine/acetylornithine aminotransferase
cn_combo_scaffold_1769_13
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12376..13278)
DNA (903bp) protein (301aa)
amidinotransferase n=1 Tax=Microbacterium yannicii RepID=UPI0002F95BB2
N-Dimethylarginine dimethylaminohydrolase
N-Dimethylarginine dimethylaminohydrolase {ECO:0000313|EMBL:BAJ74932.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium test
cn_combo_scaffold_1769_14
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13422..14408)
DNA (987bp) protein (329aa)
Phthiocerol synthesis polyketide synthase type I PpsC {ECO:0000313|EMBL:KJQ55924.1}; EC=2.3.1.41 {ECO:0000313|EMBL:KJQ55924.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microba
Putative zinc-containing alcohol dehydrogenase family protein n=1 Tax=termite gut metagenome RepID=S0DEK8_9ZZZZ
alcohol dehydrogenase zinc-binding domain-containing protein
cn_combo_scaffold_1769_15

Not on your lists

comp(14412..14627)
DNA (216bp) protein (72aa)
Putative transcriptional regulator n=1 Tax=termite gut metagenome RepID=S0DFR0_9ZZZZ
Putative transcriptional regulator {ECO:0000313|EMBL:CCO21350.1}; TaxID=433724 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="termite gut metagenome.;"
XRE family transcriptional regulator
cn_combo_scaffold_1769_16
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14627..15055)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000378623C
Uncharacterized protein {ECO:0000313|EMBL:CDJ99911.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
cn_combo_scaffold_1769_17
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15155..18919)
DNA (3765bp) protein (1255aa)
putA; delta-1-pyrroline-5-carboxylate dehydrogenase/proline oxidase (EC:1.5.99.8)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000376A34C
1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:KIC58128.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium homini
cn_combo_scaffold_1769_18
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19057..20994
DNA (1938bp) protein (646aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036EAE8A
Uncharacterized protein {ECO:0000313|EMBL:KHK96660.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
diguanylate phosphodiesterase
cn_combo_scaffold_1769_19
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21021..21323)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000361A0A0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHK96622.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
cn_combo_scaffold_1769_20
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21382..21633
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F1A971
Uncharacterized protein {ECO:0000313|EMBL:KHK96623.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
cn_combo_scaffold_1769_21
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21618..22430)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031B9987
Uncharacterized protein {ECO:0000313|EMBL:KHK96624.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
cn_combo_scaffold_1769_22
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22547..22888
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000302FCA5
ATP-dependent DNA ligase {ECO:0000313|EMBL:KHK96625.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
ATP-dependent DNA ligase
cn_combo_scaffold_1769_23
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23001..23423)
DNA (423bp) protein (141aa)
thioesterase n=1 Tax=Microbacterium yannicii RepID=UPI0002ED9D71
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:KDA06894.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;
hypothetical protein
cn_combo_scaffold_1769_24
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23692..24198
DNA (507bp) protein (169aa)
histone acetyltransferase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000371D3B3
Contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89255.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp.
histone acetyltransferase HPA2
cn_combo_scaffold_1769_25
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24216..24977
DNA (762bp) protein (254aa)
Coenzyme F420:L-glutamate ligase {ECO:0000313|EMBL:KJL42764.1}; EC=6.3.2.31 {ECO:0000313|EMBL:KJL42764.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacte
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037BE716
hypothetical protein
cn_combo_scaffold_1769_26
Brevibacterium sp. Ap13, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25084..26361
DNA (1278bp) protein (426aa)
Putative NreB protein n=1 Tax=Brevibacterium sp. Ap13 RepID=U5NW47_9MICO
Putative NreB protein {ECO:0000313|EMBL:AGY35328.1}; TaxID=1406197 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium sp. Ap13.;"
major facilitator transporter
cn_combo_scaffold_1769_27
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26377..27171)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KB41_9MICO
Uncharacterized protein {ECO:0000313|EMBL:CDJ99905.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
cn_combo_scaffold_1769_28
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27168..27842)
DNA (675bp) protein (225aa)
Response regulator n=1 Tax=Microbacterium sp. TS-1 RepID=U2XL32_9MICO
Response regulator receiver {ECO:0000313|EMBL:CDJ99904.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
cn_combo_scaffold_1769_29
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27830..29107)
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00036CE6A7
Signal transduction histidine kinase {ECO:0000313|EMBL:CDJ99903.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448
signal transduction histidine kinase
cn_combo_scaffold_1769_30
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29203..30270)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E0X8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC09379.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.
hypothetical protein
Displaying 30 items

View Taxonomy