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cn_combo_scaffold_2421

Alias: MIC18_73

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2421_1
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1256)
DNA (1254bp) protein (418aa)
Cro/Cl family transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003683712
Transcriptional regulator {ECO:0000313|EMBL:GAD35701.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hipB; transcriptional regulator
cn_combo_scaffold_2421_2
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1381..3255
DNA (1875bp) protein (625aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:
phosphoenolpyruvate carboxykinase n=1 Tax=Microbacterium yannicii RepID=UPI0002FF5138
pckG; phosphoenolpyruvate carboxykinase (GTP)
cn_combo_scaffold_2421_3
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3174..5306)
DNA (2133bp) protein (711aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002DDD647
Uncharacterized protein {ECO:0000313|EMBL:CDJ99725.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
multidrug ABC transporter ATPase/permease
cn_combo_scaffold_2421_4
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5401..6342
DNA (942bp) protein (314aa)
ABC transporter related protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1B7_9MICO
Nodulation ABC transporter NodI {ECO:0000313|EMBL:EZP26115.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
putative multidrug export ABC transporter ATP-binding protein
cn_combo_scaffold_2421_5
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6339..7226
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E193B6
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
ABC-2 type transporter
cn_combo_scaffold_2421_6
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7223..8071
DNA (849bp) protein (283aa)
ABC transporter n=1 Tax=Microbacterium yannicii RepID=UPI0002FA8B74
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
putative multidrug export ABC transporterpermease
cn_combo_scaffold_2421_7
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8196..9638)
DNA (1443bp) protein (481aa)
major facilitator transporter n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037FC93B
permease of the major facilitator superfamily
Permease of the major facilitator superfamily {ECO:0000313|EMBL:GAD35684.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium
cn_combo_scaffold_2421_8
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9685..10044)
DNA (360bp) protein (120aa)
Fe-S protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000362ACF3
Fe-S protein {ECO:0000313|EMBL:EXJ51126.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Fe-S protein
cn_combo_scaffold_2421_9
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10087..10572)
DNA (486bp) protein (162aa)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Microbacterium yannicii RepID=UPI0002F24658
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
6,7-dimethyl-8-ribityllumazine synthase
cn_combo_scaffold_2421_10
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10569..11843)
DNA (1275bp) protein (425aa)
riboflavin biosynthesis protein RibA n=1 Tax=Microbacterium yannicii RepID=UPI0002F40BF9
Riboflavin biosynthesis protein RibBA {ECO:0000256|SAAS:SAAS00280052}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. S
ribA; 3,4-dihydroxy-2-butanone 4-phosphate synthase
cn_combo_scaffold_2421_11
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11840..12502)
DNA (663bp) protein (221aa)
Riboflavin synthase {ECO:0000313|EMBL:KJL35547.1}; EC=2.5.1.9 {ECO:0000313|EMBL:KJL35547.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source
riboflavin synthase subunit alpha n=1 Tax=Microbacterium yannicii RepID=UPI0002E41555
riboflavin synthase alpha chain
cn_combo_scaffold_2421_12
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12502..13542)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E36D6D
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SU
ribD; pyrimidine reductase, riboflavin biosynthesis
cn_combo_scaffold_2421_13
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13845..14834)
DNA (990bp) protein (330aa)
transcriptional regulator n=1 Tax=Agromyces italicus RepID=UPI0003B2E989
Transcriptional regulator {ECO:0000313|EMBL:KFF59159.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
transcriptional regulator
cn_combo_scaffold_2421_14
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14959..16701
DNA (1743bp) protein (581aa)
FAD-dependent oxidoreductase n=1 Tax=Agromyces subbeticus RepID=UPI0003B54A41
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KFF59158.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
glycerol-3-phosphate dehydrogenase
cn_combo_scaffold_2421_15
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16821..17579
DNA (759bp) protein (253aa)
glycerol transporter n=1 Tax=Agromyces italicus RepID=UPI0003B41CFA
Glycerol transporter {ECO:0000313|EMBL:KFF59157.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
glpF; glycerol uptake facilitator protein, MIP family
cn_combo_scaffold_2421_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17631..19145
DNA (1515bp) protein (505aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:
Glycerol kinase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RV24_LEIAQ
glycerol kinase
cn_combo_scaffold_2421_17
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19221..20081)
DNA (861bp) protein (287aa)
DNA lyase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036CF68C
Formamidopyrimidine-DNA glycosylase {ECO:0000313|EMBL:GAD35678.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.
mutM2; formamidopyrimidine-DNA glycosylase
cn_combo_scaffold_2421_18
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20275..21279)
DNA (1005bp) protein (335aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
Tryptophan--tRNA ligase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YRL7_9MICO
trpS; tryptophanyl-tRNA synthetase
cn_combo_scaffold_2421_19
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21321..22166)
DNA (846bp) protein (282aa)
Exonuclease III n=1 Tax=Microbacterium sp. TS-1 RepID=U2YYY7_9MICO
Exonuclease III {ECO:0000313|EMBL:GAD35673.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
exonuclease III
cn_combo_scaffold_2421_20
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22203..23483)
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000362130C
Ribonuclease BN-like family protein {ECO:0000313|EMBL:KJL23197.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;
hypothetical protein
cn_combo_scaffold_2421_21
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23493..24278)
DNA (786bp) protein (262aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriac
succinate dehydrogenase n=1 Tax=Microbacterium yannicii RepID=UPI00030CCEF9
sdhB; succinate dehydrogenase/fumarate reductase, Fe-S protein subunit
cn_combo_scaffold_2421_22
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24278..26092)
DNA (1815bp) protein (605aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriac
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NCE2_MICTS
sdhA; succinate dehydrogenase/fumarate reductase, flavoprotein subunit
cn_combo_scaffold_2421_23
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26157..26348)
DNA (192bp) protein (64aa)
Succinate dehydrogenase cytochrome b subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1D8_9MICO
Succinate dehydrogenase {ECO:0000313|EMBL:EXJ53200.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
sdhD; succinate dehydrogenase, hydrophobic anchor subunit
Displaying 23 items

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