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cn_combo_scaffold_2587

Alias: MIC18_76

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2587_1
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..139
DNA (138bp) protein (46aa)
50S ribosomal protein L33 n=3 Tax=Microbacterium RepID=H8E6X1_9MICO
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
rpmG; ribosomal protein L33
cn_combo_scaffold_2587_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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144..449
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035F7FE7
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
rpsN; ribosomal protein S14
cn_combo_scaffold_2587_3
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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676..963
DNA (288bp) protein (96aa)
Bacterial nucleoid DNA-binding protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAJ7_MICTS
hup; bacterial nucleoid DNA-binding protein
Bacterial nucleoid DNA-binding protein {ECO:0000313|EMBL:BAJ74653.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testace
cn_combo_scaffold_2587_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1041..3074
DNA (2034bp) protein (678aa)
copper transporter n=1 Tax=Microbacterium yannicii RepID=UPI0002FAEAD6
Cytochrome c oxidase caa3 assembly factor (Caa3-CtaG) {ECO:0000313|EMBL:KJL42778.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microba
hypothetical protein
cn_combo_scaffold_2587_5
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3102..4166)
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000374A911
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ74655.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB
cn_combo_scaffold_2587_6
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4215..5588
DNA (1374bp) protein (458aa)
helicase n=1 Tax=Microbacterium yannicii RepID=UPI0002D5E927
ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member
ATP-dependent exoDNAse (Exonuclease V), alpha subunit-helicase superfamily I member {ECO:0000313|EMBL:BAJ74659.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Mic
cn_combo_scaffold_2587_7
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5610..6263)
DNA (654bp) protein (218aa)
Heme oxygenase 1 {ECO:0000313|EMBL:KJL37162.1}; EC=1.14.99.3 {ECO:0000313|EMBL:KJL37162.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
heme oxygenase n=1 Tax=Microbacterium yannicii RepID=UPI0002F400A0
hmuO; heme oxygenase
cn_combo_scaffold_2587_8
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6422..8758
DNA (2337bp) protein (779aa)
Glycosidase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGY1_MICTS
glycosidase
Glycosidase {ECO:0000313|EMBL:BAJ76640.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
cn_combo_scaffold_2587_9
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8755..9330
DNA (576bp) protein (192aa)
Acetyltransferase, including N-acetylase of ribosomal proteins n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGN7_MICTS
acetyltransferase, including N-acetylase of ribosomal proteins
Acetyltransferase, including N-acetylase of ribosomal proteins {ECO:0000313|EMBL:BAJ75336.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source
cn_combo_scaffold_2587_10
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9343..9618)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003734CFF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYT60503.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
cn_combo_scaffold_2587_11
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9732..10997
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E34534
Uncharacterized protein {ECO:0000313|EMBL:EQM72716.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
beta-lactamase class C and other penicillin binding proteins
cn_combo_scaffold_2587_12
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11002..11877
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035EC2B0
Inner membrane transporter RhtA {ECO:0000313|EMBL:EZP27840.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
permease, DMT superfamily
cn_combo_scaffold_2587_13
Mycobacterium sinense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12011..13513
DNA (1503bp) protein (501aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00037A049A
aldehyde dehydrogenase rbh
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=875328 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain JDM601).
cn_combo_scaffold_2587_14
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13569..14924)
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00037D58F3
Uncharacterized protein {ECO:0000313|EMBL:EYT52558.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
GntR family transcriptional regulator with aminotransferase domain
cn_combo_scaffold_2587_15
Williamsia sp. D3, Williamsia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15002..15844
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Williamsia sp. D3 RepID=V8CU03_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETD30515.1}; TaxID=1313067 species="Bacteria; Actinobacteria; Corynebacteriales; Williamsiaceae; Williamsia.;" source="Williamsia sp. D3.;"
ABC transporter substrate binding protein (amino acid)
cn_combo_scaffold_2587_16
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15855..16589
DNA (735bp) protein (245aa)
amino acid ABC transporter permease n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI0002888087
Amino acid ABC transporter permease {ECO:0000313|EMBL:KHK95834.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.
polar amino acid ABC transporter inner membrane subunit
cn_combo_scaffold_2587_17

Not on your lists

16582..17364
DNA (783bp) protein (261aa)
Amino acid ABC transporter ATP-binding protein n=1 Tax=Arthrobacter globiformis NBRC 12137 RepID=H0QK05_ARTGO
Arginine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGA21085.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
ABC transporter
cn_combo_scaffold_2587_18
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

17444..18445
DNA (1002bp) protein (334aa)
Amidinotransferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C889_SPHTD
amidinotransferase
Amidinotransferase {ECO:0000313|EMBL:ACZ40032.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sp
cn_combo_scaffold_2587_19
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18445..20148
DNA (1704bp) protein (568aa)
Thiamine pyrophosphate protein TPP binding domain protein n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6YAT0_THEBD
Acetolactate synthase {ECO:0000313|EMBL:EWT03612.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.
thiamine pyrophosphate domain-containing TPP-binding protein
cn_combo_scaffold_2587_20
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20132..21367
DNA (1236bp) protein (412aa)
peptidase M20 n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00036F99FC
Peptidase M20 {ECO:0000313|EMBL:EYT51791.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
N-carbamoyl-L-amino acid amidohydrolase
cn_combo_scaffold_2587_21
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21401..21496)
DNA (96bp) protein (32aa)
Transposase, IS4 family n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0M3Q9_ARTPP
transposase, IS4 family
Transposase, IS4 family {ECO:0000313|EMBL:ADX73344.1}; TaxID=930171 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans (strain DS
Displaying 21 items

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