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cn_combo_scaffold_2742

Alias: MIC18_83

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2742_1
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

146..2317
DNA (2172bp) protein (724aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00037BDD41
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component {ECO:0000313|EMBL:BAJ74486.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacter
cn_combo_scaffold_2742_2
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2441..3427
DNA (987bp) protein (329aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;"
thioredoxin reductase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003700216
trxB; thioredoxin reductase
cn_combo_scaffold_2742_3
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3500..3823
DNA (324bp) protein (108aa)
thioredoxin n=1 Tax=Microbacterium yannicii RepID=UPI000316C365
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
trxA; thiol-disulfide isomerase and thioredoxins
cn_combo_scaffold_2742_4
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3914..4261)
DNA (348bp) protein (116aa)
tryptophan synthase subunit alpha n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037BF63E
Tryptophan synthase subunit alpha {ECO:0000313|EMBL:KEP74883.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005
tryptophan synthase alpha chain
cn_combo_scaffold_2742_5
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4316..5326)
DNA (1011bp) protein (337aa)
chromosome partitioning protein ParB n=1 Tax=Microbacterium yannicii RepID=UPI0002F4976E
Chromosome partitioning protein ParB {ECO:0000313|EMBL:EXJ51403.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-
parB; transcriptional regulator
cn_combo_scaffold_2742_6
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5326..6261)
DNA (936bp) protein (312aa)
chromosome partitioning protein n=1 Tax=Microbacterium yannicii RepID=UPI00037BA7DD
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:EIC06502.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevanifor
parA; ATPase
cn_combo_scaffold_2742_7
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(6644..6916)
DNA (273bp) protein (91aa)
Excinuclease ABC C subunit domain protein n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PG63_9CYAN
Excinuclease ABC C subunit domain-containing protein
Tax=BJP_IG2157_Anaerolineales_55_23
cn_combo_scaffold_2742_8
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7530..8186)
DNA (657bp) protein (219aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA
16S rRNA methyltransferase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003742983
gidB; S-adenosylmethionine-dependent methyltransferase
cn_combo_scaffold_2742_9
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8188..8697)
DNA (510bp) protein (170aa)
DNA-binding protein n=1 Tax=Microbacterium yannicii RepID=UPI00030EAEA5
DNA-binding protein {ECO:0000313|EMBL:KDA05133.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
RNA-binding protein
cn_combo_scaffold_2742_10
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8726..9832)
DNA (1107bp) protein (369aa)
preprotein translocase subunit YidC n=1 Tax=Microbacterium yannicii RepID=UPI000303F6B8
Contig_32, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89020.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp.
preprotein translocase subunit YidC
cn_combo_scaffold_2742_11
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9841..10197)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002ED97FE
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriacea
hypothetical protein
cn_combo_scaffold_2742_12
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10194..10535)
DNA (342bp) protein (114aa)
Ribonuclease P protein component n=1 Tax=Microbacterium sp. TS-1 RepID=U2YVB5_9MICO
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
RNase P protein component
cn_combo_scaffold_2742_13
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(10545..10682)
DNA (138bp) protein (46aa)
50S ribosomal protein L34 n=2 Tax=Microbacterium RepID=H8E9B4_9MICO
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
rpmH; ribosomal protein L34
cn_combo_scaffold_2742_14
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10992..12428
DNA (1437bp) protein (479aa)
chromosomal replication initiation protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035EA027
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbact
dnaA; ATPase
cn_combo_scaffold_2742_15
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12885..14036
DNA (1152bp) protein (384aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1504156 species="Bacte
DNA polymerase III subunit beta n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035C23A1
dnaN; DNA polymerase sliding clamp subunit
cn_combo_scaffold_2742_16
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14086..15279
DNA (1194bp) protein (398aa)
DNA repair protein RecF n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037F5F20
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacteriu
recF; recombinational DNA repair ATPase
cn_combo_scaffold_2742_17
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15266..15775
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00030F4A34
Zn-ribbon protein {ECO:0000313|EMBL:EZP27682.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives
cn_combo_scaffold_2742_18
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15897..17939
DNA (2043bp) protein (681aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1504156 species="Bacteria; A
DNA gyrase subunit B n=1 Tax=Microbacterium yannicii RepID=UPI0002E01589
gyrB; type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
cn_combo_scaffold_2742_19
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


17990..20419
DNA (2430bp) protein (810aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium
DNA gyrase subunit A n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037163F6
gyrA; type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
Displaying 19 items

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