ggKbase home page

cn_combo_scaffold_182_13

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(10524..11153)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Microbacterium barkeri RepID=UPI00030819E7 similarity UNIREF
DB: UNIREF100
  • Identity: 96.7
  • Coverage: 209.0
  • Bit_score: 400
  • Evalue 8.80e-109
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 209.0
  • Bit_score: 399
  • Evalue 3.60e-108
rpsD; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 209.0
  • Bit_score: 379
  • Evalue 5.90e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 630
GTGGCAACGAAGTCCCAGGACCGCCGCAAGGTCCGTCTGTCCCGCGCCCTCGGCGTGGCCCTCACCCCGAAGGCCGCCCGCTACCTCGAGAAGCGTCCCTACGCTCCGGGTGAGCACGGTCGCACCAAGCGCAAGGCCGACAGCGACTACGCCGTCCGTCTGCGTGAGAAGCAGCGTCTGCGCGAGCAGTACGGCATCCGCGAGAAGCAGATGCGCAACACCTTCAACGAGGCCCGTCGCAAGGACGGCCTGACGGGTGAGAACCTCGTCGAGCTGCTCGAGATGCGTCTGGACGCGCTCGTCCTGCGTGCCGGCTTCGCCCGCACCACCGCGCAGGCCCGCCAGCTCGTCGTGCACCGCCACATCCTCGTCGACGGCGAGCTCGTGGACCGCCCGTCGTTTCGCGTGAAGCCGGGTCAGCTCATCCACGTGAAGGCGAAGAGCGAGGGCACCGAGCCCTTCCAGGTCGCCGCCGCCGGTGGGCACGCCGAGGTGCTGCCCCCCGTTCCGGGCTACATCGAGGTCGAGCTCGACAAGCTGCAGGCGCGTCTCGTGCGTCGCCCGAAGCGCGCCGAGGTTCCCGTGGTCTGCGACGTCCAGCTGGTCGTCGAGTACTACGCGGCCCGCTGA
PROTEIN sequence
Length: 210
VATKSQDRRKVRLSRALGVALTPKAARYLEKRPYAPGEHGRTKRKADSDYAVRLREKQRLREQYGIREKQMRNTFNEARRKDGLTGENLVELLEMRLDALVLRAGFARTTAQARQLVVHRHILVDGELVDRPSFRVKPGQLIHVKAKSEGTEPFQVAAAGGHAEVLPPVPGYIEVELDKLQARLVRRPKRAEVPVVCDVQLVVEYYAAR*