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cn_combo_scaffold_182

Alias: MIC18_1

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Displaying items 1-30 of 139 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_182_1
unknown

Not on your lists

comp(1..75)
DNA (75bp) protein (25aa)

This feature has no annotations

cn_combo_scaffold_182_2
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(135..545)
DNA (411bp) protein (137aa)
N utilization substance protein B homolog n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFL1_MICTS
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1504156 species="Bacteria; Acti
nusB; transcription termination factor
cn_combo_scaffold_182_3
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(549..1109)
DNA (561bp) protein (187aa)
elongation factor P n=1 Tax=Microbacterium yannicii RepID=UPI000314D9EB
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.
efp; translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)
cn_combo_scaffold_182_4
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1171..1638)
DNA (468bp) protein (156aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169,
3-dehydroquinate dehydratase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037F7CE1
aroQ; 3-dehydroquinate dehydratase II
cn_combo_scaffold_182_5
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1681..2772)
DNA (1092bp) protein (364aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales
3-dehydroquinate synthase n=1 Tax=Microbacterium yannicii RepID=UPI0002DD11AB
aroB; 3-dehydroquinate synthetase
cn_combo_scaffold_182_6
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2769..3341)
DNA (573bp) protein (191aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=979556 species="Bacteria; Actinobacteria; Microco
shikimate kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D9E87
shikimate kinase
cn_combo_scaffold_182_7
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3328..4554)
DNA (1227bp) protein (409aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
chorismate synthase n=1 Tax=Microbacterium yannicii RepID=UPI0003819067
chorismate synthase
cn_combo_scaffold_182_8
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4559..5434)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003820440
Shikimate dehydrogenase {ECO:0000313|EMBL:KHK98982.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
shikimate 5-dehydrogenase
cn_combo_scaffold_182_9
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5428..7005)
DNA (1578bp) protein (526aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003752943
Aminodeoxychorismate lyase {ECO:0000313|EMBL:CDK00834.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
periplasmic solute-binding protein
cn_combo_scaffold_182_10
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7005..7364)
DNA (360bp) protein (120aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=104336 specie
Holliday junction resolvase n=1 Tax=Microbacterium yannicii RepID=UPI0002E082F4
endonuclease
cn_combo_scaffold_182_11
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(7470..10127)
DNA (2658bp) protein (886aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
alanyl-tRNA synthetase n=1 Tax=Microbacterium yannicii RepID=UPI0002F799DE
alaS; alanyl-tRNA synthetase
cn_combo_scaffold_182_12
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10182..10412)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002DF0BA7
Fe3+-hydroxamate ABC transporter substrate-bindng protein {ECO:0000313|EMBL:GAD33219.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Mi
ATPase
cn_combo_scaffold_182_13
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(10524..11153)
DNA (630bp) protein (210aa)
30S ribosomal protein S4 n=1 Tax=Microbacterium barkeri RepID=UPI00030819E7
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
rpsD; 30S ribosomal protein S4
cn_combo_scaffold_182_14
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11339..12688)
DNA (1350bp) protein (450aa)
ATPase AAA n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D18BB
ATPase AAA {ECO:0000313|EMBL:EXJ50643.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
ATPase
cn_combo_scaffold_182_15
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12803..13117
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2YR33_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAD33223.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
dioxygenase
cn_combo_scaffold_182_16
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13207..14481
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003826A7F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ76475.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB
cn_combo_scaffold_182_17
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14560..15111
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F59DC5
Uncharacterized protein {ECO:0000313|EMBL:EXJ50641.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
SAM-dependent methyltransferase
cn_combo_scaffold_182_18
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15090..17231)
DNA (2142bp) protein (714aa)
(p)ppGpp synthetase n=1 Tax=Microbacterium yannicii RepID=UPI000316A467
Guanosine polyphosphate pyrophosphohydrolase/synthetase {ECO:0000313|EMBL:BAJ76473.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Micro
relA; guanosine polyphosphate pyrophosphohydrolase/synthetase
cn_combo_scaffold_182_19
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17401..18390)
DNA (990bp) protein (330aa)
preprotein translocase subunit SecF n=1 Tax=Microbacterium yannicii RepID=UPI0003732455
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium homin
preprotein translocase subunit SecF
cn_combo_scaffold_182_20
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18390..20120)
DNA (1731bp) protein (577aa)
preprotein translocase subunit SecD n=1 Tax=Microbacterium yannicii RepID=UPI0002E4D27D
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral
preprotein translocase subunit SecD
cn_combo_scaffold_182_21
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20159..20608)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031CA844
preprotein translocase subunit YajC
Preprotein translocase subunit YajC {ECO:0000313|EMBL:BAJ76470.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum
cn_combo_scaffold_182_22
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20683..21711)
DNA (1029bp) protein (343aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Mic
Holliday junction DNA helicase RuvB n=1 Tax=Microbacterium yannicii RepID=UPI0002FF48BE
ruvB; holliday junction resolvasome, helicase subunit
cn_combo_scaffold_182_23
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21704..22330)
DNA (627bp) protein (209aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00036FAD9E
holliday junction resolvasome, DNA-binding subunit
cn_combo_scaffold_182_24
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22375..22926)
DNA (552bp) protein (184aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
crossover junction endodeoxyribonuclease RuvC n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035F7DA0
holliday junction resolvasome, endonuclease subunit
cn_combo_scaffold_182_25
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22997..23755)
DNA (759bp) protein (253aa)
Probable transcriptional regulatory protein OR221_1347 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3B7_9MICO
Probable transcriptional regulatory protein OR221_1347 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="M
hypothetical protein
cn_combo_scaffold_182_26
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23779..24372)
DNA (594bp) protein (198aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase g
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000373E226
glutamine amidotransferase
cn_combo_scaffold_182_27
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24369..25259)
DNA (891bp) protein (297aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1
Pyridoxal biosynthesis lyase PdxS n=2 Tax=Microbacterium RepID=H8E3B3_9MICO
pyridoxine biosynthesis protein
cn_combo_scaffold_182_28
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25358..26713
DNA (1356bp) protein (452aa)
transcriptional regulator n=1 Tax=Agromyces subbeticus RepID=UPI0003B76D11
Transcriptional regulator {ECO:0000313|EMBL:KIC57545.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transcriptional regulator
cn_combo_scaffold_182_29
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26721..27572
DNA (852bp) protein (284aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" sou
pyridoxamine kinase n=1 Tax=Microbacterium paraoxydans RepID=UPI0003810649
pyridoxal/pyridoxine/pyridoxamine kinase
cn_combo_scaffold_182_30
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27579..28205)
DNA (627bp) protein (209aa)
Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFH9_MICTS
phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain {ECO:0000313|EMBL:BAJ76461.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;"
Displaying items 1-30 of 139 in total

View Taxonomy