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cn_combo_scaffold_242_82

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(81735..82121)

Top 3 Functional Annotations

Value Algorithm Source
twitching motility protein PilT n=1 Tax=Glaciibacter superstes RepID=UPI0003B3F718 similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 127.0
  • Bit_score: 186
  • Evalue 2.10e-44
Uncharacterized protein {ECO:0000313|EMBL:GAB92071.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.9
  • Coverage: 126.0
  • Bit_score: 157
  • Evalue 1.10e-35
PIN domain protein, Putative toxin of TAS system similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 127.0
  • Bit_score: 147
  • Evalue 2.30e-33

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Taxonomy

Gordonia rhizosphera → Gordonia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 387
GTGACCACCGCCTACCTCGACACCTCAGCCGCGATGAAGCTTCTCATCGACGAACCGGAGTCGGAGGCGCTCTCGCTCACCCTCGTCGGCTCCGGCCGACGTCTCGCGGCGTCGTGGCTGCTTCACACCGAGCTGCACCGCGCGGCAGGGCGAAACCCCTCCGACATCCCGCTCGACTCCATCGCGCTCCTCCTCGACACGGTCACACTGGTCGACATCACGCGCGGTGATCTCCTCAGCGCCGGGACGCACGCGCCCCTGCGGTCGAACGACGCGATCCATCTCGCGACGGCCCTGAGAATCGGCGCCGACGAGGTGGTCACATACGACGCCGAGCTCTCGACGGCGGCCACGGCGGCGGGCCTCAGCGTCATCGCCCCGCGCTGA
PROTEIN sequence
Length: 129
VTTAYLDTSAAMKLLIDEPESEALSLTLVGSGRRLAASWLLHTELHRAAGRNPSDIPLDSIALLLDTVTLVDITRGDLLSAGTHAPLRSNDAIHLATALRIGADEVVTYDAELSTAATAAGLSVIAPR*