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cn_combo_scaffold_242_87

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(88795..89619)

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Curtobacterium sp. B8 RepID=UPI0003B32F59 similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 259.0
  • Bit_score: 321
  • Evalue 1.20e-84
Contig_127, whole genome shotgun sequence {ECO:0000313|EMBL:KIU01857.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 275.0
  • Bit_score: 330
  • Evalue 2.70e-87
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 264.0
  • Bit_score: 284
  • Evalue 4.50e-74

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Taxonomy

Frigoribacterium sp. MEB024 → Frigoribacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGAGCGACGAGGAGCGCCCGCGGCGCGGCGGGGTCGACACGGCATCGGCGAGAGCGCTACAGGAAACGATCGACGCCTATTCGCTTACCCTCGAGTCCATCCTGGCGGCGCTGCGTTCCCGCCGACTAGATGACCGTGCCGCCAGAAGCGCGGCGCTGGATCTCGCCGCCAGTGCACTCATCGACGCGCGCACAGCCACCGATACCTACCAGACGCTCGCGTTCGAGCCCGTCGTGGGCGCGTTCGCCCGACTGCGCAGTGATCTCCGACCGCTCGTGCGATTCGGCGACCTCGAAGTGCAGTTCGTGGAACCGCCAGCGAGCGGGCGGGCGCTCCCCGGAGACATCGCGCAGGAGGCACGCGCGATCGTGCGGGCATCCGTGTTGGCCGTGGTCGACGAGGGGATCGCGCGGCGGGTGCGAATCCAGTGGGATTGCGACGGGCTGCACCTCCTTGTCCGCATAAGGGATGACGGCGCCGGACGCATGTCCGGCCGTGACGACGCCCTTCGTCCGCTCACCGAGCGCGTGACCGCCATCGGCGGCCAGATCGCGGTGACCTCGACGGAGGGATGGGGCACGGCGATCGACGTCACCATCCCGCTCGATCCGCCCGCCACCCTCCTCCCCCCGTTTGAAAATGCAGACCTCACCAAACGTGAACGCGAGGTTCTGCAGGGGATCGCGGACGGAGCACGGAACCGTGAGATCGCAGGGCAGCTGGGAATAGGCGAGAACACCGTGCGCTTCCACGTCTCCAACATCCTCCGAAAGGTCGGCGCCCGATCCCGCACTCATCTGGCTGCGATGGTGCTCCGCGGCTAG
PROTEIN sequence
Length: 275
MSDEERPRRGGVDTASARALQETIDAYSLTLESILAALRSRRLDDRAARSAALDLAASALIDARTATDTYQTLAFEPVVGAFARLRSDLRPLVRFGDLEVQFVEPPASGRALPGDIAQEARAIVRASVLAVVDEGIARRVRIQWDCDGLHLLVRIRDDGAGRMSGRDDALRPLTERVTAIGGQIAVTSTEGWGTAIDVTIPLDPPATLLPPFENADLTKREREVLQGIADGARNREIAGQLGIGENTVRFHVSNILRKVGARSRTHLAAMVLRG*