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cn_combo_scaffold_408_62

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(57618..58601)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type proline/glycine betaine transport system, permease component n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N8E3_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 326.0
  • Bit_score: 482
  • Evalue 3.60e-133
Glycine betaine transport system permease protein OpuAB {ECO:0000313|EMBL:CDK01088.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Micr similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 326.0
  • Bit_score: 531
  • Evalue 7.30e-148
proW; glycine/betaine ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 326.0
  • Bit_score: 482
  • Evalue 1.00e-133

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Taxonomy

Microbacterium sp. C448 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 984
ATGGATGGTTTCCGCGTGCCCGTCGGCGACTGGATCGACACCGGCGTCGATTGGCTCCGCGACAACCTCTCCGGCCTGTTCGACATCATCAGCATCGTCGTCCGCTTCCTGGTCGACGGACTCACGGACGTCCTCATCGCCGTCCCCGTGCCGCTGGCGATCGTCGTCTTCGCCCTGCTCGGCTGGTTCTTCCGCTCCTGGCAGATGGCGATCGGCACCGCGGCGACCTTCACGCTGATCGTCGCGATGAATCTGTGGGTGCCGGCGATGCAGACGCTCTCGCTGGTCCTCGTCGCCACGGTGGTGGCCCTCCTCATCGGCATCCCGCTGGGGATCTGGTCGGCGCGCAACGACACCGTCCGCGCGATCCTCAAGCCGATCCTGGACTTCATGCAGACGATGCCTGCCTTCGTCTACCTGATCCCCGCCATCACGTTCTTCAGCATCGGCGTCGTCCCGGGCGTCGTCGCGACGGTCATCTTCGCGCTGCCCCCCGGGGTGCGTCTGACCGAGCTCGGCATCCGCGGGGTCGACTCCGAGACCGTCGAGGCGGGGCACGCGTTCGGCGCGAAGCCCGGGCAGATCCTCCGCGGCATCCAGCTGCCGCTCGCGATGCCCACCATCATGGCGGGCGTCAACCAGGTGATCATGCTGGCCCTGTCGATGGCGGTGCTCGCGGGTATCGTCGGCGCGGACGGCCTCGGCAAGATCGTCGTGCAGTCGGTGTCGACCGTGAACCTCTCCCTCGGCGTCGAGGCGGGCCTCGGCGTCGTGATCCTCGCCGTCTTCCTCGACCGCGTGACCGCCTCGCTGGGCAACCCCGCCGACTACCCGCGGTCGCTCCGGGCGAAGCTCGGGCGCGGGCGTGCGATGCGCGGCTCCGGCGGGCCCGCCGTCACCGAGAGCGCGGACGCGTCCGCCGAGGCCGAGCGCGAGGTCGCGTCCCCGCGGCGCGCTCCGGTCGGCGGCGGCGGAGCGCTGTAG
PROTEIN sequence
Length: 328
MDGFRVPVGDWIDTGVDWLRDNLSGLFDIISIVVRFLVDGLTDVLIAVPVPLAIVVFALLGWFFRSWQMAIGTAATFTLIVAMNLWVPAMQTLSLVLVATVVALLIGIPLGIWSARNDTVRAILKPILDFMQTMPAFVYLIPAITFFSIGVVPGVVATVIFALPPGVRLTELGIRGVDSETVEAGHAFGAKPGQILRGIQLPLAMPTIMAGVNQVIMLALSMAVLAGIVGADGLGKIVVQSVSTVNLSLGVEAGLGVVILAVFLDRVTASLGNPADYPRSLRAKLGRGRAMRGSGGPAVTESADASAEAEREVASPRRAPVGGGGAL*