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cn_combo_scaffold_408_88

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(85449..85655)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003708844 similarity UNIREF
DB: UNIREF100
  • Identity: 97.1
  • Coverage: 68.0
  • Bit_score: 139
  • Evalue 1.20e-30
Cold shock protein ScoF {ECO:0000313|EMBL:EPD85818.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 st similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 68.0
  • Bit_score: 138
  • Evalue 2.90e-30
csp; cold shock proteins similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 68.0
  • Bit_score: 132
  • Evalue 5.40e-29

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Taxonomy

Microbacterium sp. oral taxon 186 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 207
ATGAGCACGCAGGGCACCGTCAAGTGGTTCAACTCGGAGAAGGGCTTCGGGTTCATCGCACCCGACGAGGGCGGCGCCGACGTCTTCGCCCATTACAGCGCGATCGAGGCCAGCGGCTACCGCTCGCTCGAGGAGAACCAGCGCGTCGAGTTCGAGATCGCCCAGGGTCCCAAGGGCCTGCAGGCGGAGAACATCCGCCCGCTCTGA
PROTEIN sequence
Length: 69
MSTQGTVKWFNSEKGFGFIAPDEGGADVFAHYSAIEASGYRSLEENQRVEFEIAQGPKGLQAENIRPL*