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cn_combo_scaffold_1301_45

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: 48271..49305

Top 3 Functional Annotations

Value Algorithm Source
transcription antitermination factor NusG n=1 Tax=Microbacterium yannicii RepID=UPI0002D408DF similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 368.0
  • Bit_score: 561
  • Evalue 6.40e-157
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 351.0
  • Bit_score: 557
  • Evalue 1.70e-155
nusG; transcription antiterminator similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 381.0
  • Bit_score: 500
  • Evalue 5.00e-139

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Taxonomy

Microbacterium oxydans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
GTGACGGAACGATATGTCGACGACGCCGACTGGGCGACCGCGGCCGAGCAGTCCTCCGAGGACGACGAGGCGCAGGAGGGCAACCAGCTGGCCGCCGAGGAGCTCGCGGTGACCCCCGCCGAGCACGTCGCCATCCACATCGTCGAGGACCAGCCCGAAGAGGACACCACCGACCTCGACGACATCGAGATCGCCGACCCGGAGGCCGACGCCATCGTGAACGACGCCCTGCACATCGACGAGGCCGCCGAGGCCGAGGCCGCGGCCGAGGTCCTCAACGACTCGATCGCCGAAGAGGCGGAGGAGTACGCCGCCGAGCACGCTGACGACGTCACCCCGTACGACGGGCCCGACGTGAACGGCGACGACGAGGACGAGGCATCCGTCGAGGACGAGGCATCCGACGAGGACGAGGACCCCTACGAGGCGTTCCGCACCGAGCTGCGCAGCCTCCCGGGCAAGTGGTACGTCATCCACTCCTACGCCGGCTTCGAGCGCAAGGTGAAGGCCAACATCGAGCAGCGCAAGTCCACGCTCGAGGTCGAGGAAGACATCTACCAGATCGAGGTCCCCATGGAGGACGTCGTCGAGATCAAGAACGGACAGCGCAAGATGGTCACGCGCGTCCGGATCCCCGGCTACGTGCTCGTGCGCATGGAGCTGAATGAGGACACCTGGTCGGTCGTGCGTCACACGCCCGGCGTCACCGGCTTCGTCGGCAATGCCCACAACCCGACCCCCCTCCGCTTCGAGGAGGCCTTCACGATGCTGAAGTCCCTCGTCGAGGTCAAGGATGTCGCTCCCGCCAAGGGCGCTGCGGCCAAGCAGGGCCAGCAGGCAGCGGCCCGCGTGCTGCCCGCCGAGGTCGACTTCGAGGTCGGCGAGACGATCACCATCAAGGAGGGCTCGTTCGCCGGGCTTCCCGGAACGATCAGCGAGATCAAGCCCGAGAGCGGCAAGCTCACGGTCCTCGTCTCCCTGTTCGAGCGCGAGACCCCCGTCGAGCTGTCGTTCGACCAGGTCACGAAGCTGTAA
PROTEIN sequence
Length: 345
VTERYVDDADWATAAEQSSEDDEAQEGNQLAAEELAVTPAEHVAIHIVEDQPEEDTTDLDDIEIADPEADAIVNDALHIDEAAEAEAAAEVLNDSIAEEAEEYAAEHADDVTPYDGPDVNGDDEDEASVEDEASDEDEDPYEAFRTELRSLPGKWYVIHSYAGFERKVKANIEQRKSTLEVEEDIYQIEVPMEDVVEIKNGQRKMVTRVRIPGYVLVRMELNEDTWSVVRHTPGVTGFVGNAHNPTPLRFEEAFTMLKSLVEVKDVAPAKGAAAKQGQQAAARVLPAEVDFEVGETITIKEGSFAGLPGTISEIKPESGKLTVLVSLFERETPVELSFDQVTKL*