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cn_combo_scaffold_1301

Alias: MIC18_29

Search features with annotation key words

Displaying items 31-59 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1301_28
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28787..29236
DNA (450bp) protein (150aa)
UPF0336 protein MTES_2416 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGT1_MICTS
hypothetical protein
UPF0336 protein MTES_2416 {ECO:0000256|HAMAP-Rule:MF_00799}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strai
cn_combo_scaffold_1301_29
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29233..29640
DNA (408bp) protein (136aa)
acyl dehydratase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036EEFED
Uncharacterized protein {ECO:0000313|EMBL:EPD84896.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 st
acyl dehydratase
cn_combo_scaffold_1301_30
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29645..30781
DNA (1137bp) protein (379aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
UDP-N-acetylmuramate dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000367DACB
UDP-N-acetylmuramate dehydrogenase
cn_combo_scaffold_1301_31
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30802..32010)
DNA (1209bp) protein (403aa)
Aspartate aminotransferase {ECO:0000313|EMBL:CDJ99023.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CDJ99023.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;
aspartate aminotransferase n=1 Tax=Microbacterium paraoxydans RepID=UPI0003606890
aspC; aspartate/tyrosine/aromatic aminotransferase
cn_combo_scaffold_1301_32
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32069..32404)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000366EB7B
Uncharacterized protein {ECO:0000313|EMBL:ETK33068.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
YCII-like protein
cn_combo_scaffold_1301_33
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32480..34075)
DNA (1596bp) protein (532aa)
Isocitrate lyase {ECO:0000313|EMBL:KHK98048.1}; EC=4.1.3.1 {ECO:0000313|EMBL:KHK98048.1};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="
isocitrate lyase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037B5F6C
aceA; isocitrate lyase
cn_combo_scaffold_1301_34
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34104..35759)
DNA (1656bp) protein (552aa)
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" sourc
malate synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037E56D2
aceB; malate synthase
cn_combo_scaffold_1301_35
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35898..37379
DNA (1482bp) protein (494aa)
XRE family transcriptional regulator n=1 Tax=Microbacterium yannicii RepID=UPI00037ACB83
Anaerobic benzoate catabolism transcriptional regulator {ECO:0000313|EMBL:KJL36856.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Micro
transcriptional regulator
cn_combo_scaffold_1301_36
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37405..38790)
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031CA4E5
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KHK98953.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
FAD-dependent oxidoreductase
cn_combo_scaffold_1301_37
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38806..40365)
DNA (1560bp) protein (520aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036A488D
Polyketide synthase regulator {ECO:0000313|EMBL:KHK98952.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
regulator of polyketide synthase expression
cn_combo_scaffold_1301_38
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40472..41830
DNA (1359bp) protein (453aa)
4-aminobutyrate aminotransferase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036E6745
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:EZP28030.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
gabT; 4-aminobutyrate aminotransferase
cn_combo_scaffold_1301_39
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41933..43294
DNA (1362bp) protein (454aa)
Putrescine oxidase n=1 Tax=Microbacterium yannicii RepID=UPI0002F8E69E
Putrescine oxidase {ECO:0000313|EMBL:KDA07099.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
putrescine oxidase
cn_combo_scaffold_1301_40
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43291..44181
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Microbacterium RepID=UPI00037684B8
UspA domain-containing protein {ECO:0000313|EMBL:EZP28027.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
universal stress protein UspA
cn_combo_scaffold_1301_41
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44178..45728
DNA (1551bp) protein (517aa)
Large neutral amino acids transporter small subunit 2 n=1 Tax=Microbacterium yannicii RepID=UPI0003048F3A
Large neutral amino acids transporter small subunit 2 {ECO:0000313|EMBL:KDA07101.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microb
amino acid transporters
cn_combo_scaffold_1301_42
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45764..47125
DNA (1362bp) protein (454aa)
Succinate-semialdehyde dehydrogenase [NADP(+)] 1 {ECO:0000313|EMBL:KJL36849.1}; EC=1.2.1.79 {ECO:0000313|EMBL:KJL36849.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteria
succinate-semialdehyde dehdyrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00038023C9
NAD-dependent aldehyde dehydrogenase
cn_combo_scaffold_1301_43
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

47209..47646
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003730669
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:EXJ50872.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;
hypothetical protein
cn_combo_scaffold_1301_trna_4
unknown

Not on your lists

47798..47870
DNA (73bp)
transferRNA
cn_combo_scaffold_1301_44
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

47916..48188
DNA (273bp) protein (91aa)
preprotein translocase subunit SecE n=1 Tax=Microbacterium yannicii RepID=UPI0002FF72D5
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG
preprotein translocase subunit SecE
cn_combo_scaffold_1301_45
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48271..49305
DNA (1035bp) protein (345aa)
transcription antitermination factor NusG n=1 Tax=Microbacterium yannicii RepID=UPI0002D408DF
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae
nusG; transcription antiterminator
cn_combo_scaffold_1301_46
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


50495..50926
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Microbacterium yannicii RepID=UPI0002FBBA26
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
rplK; 50S ribosomal protein L11
cn_combo_scaffold_1301_47
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


50941..51630
DNA (690bp) protein (230aa)
50S ribosomal protein L1 n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035CFD79
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
rplA; 50S ribosomal protein L1
cn_combo_scaffold_1301_48
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(51702..52358)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F3AF2C
Amino acid transporter {ECO:0000313|EMBL:KEP74800.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
lysine efflux permease
cn_combo_scaffold_1301_49
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

52427..53335
DNA (909bp) protein (303aa)
LysR family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B6971
Transcriptional regulator {ECO:0000313|EMBL:GAD33675.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
transcriptional regulator
cn_combo_scaffold_1301_50
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(53322..54365)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002DC3846
NADPH:quinone reductase
NADPH:quinone reductase {ECO:0000313|EMBL:BAJ75440.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB
cn_combo_scaffold_1301_51
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54433..54951)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003164ACB
Regulatory protein MarR {ECO:0000313|EMBL:EZP28011.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
transcriptional regulator
cn_combo_scaffold_1301_52
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54963..56600)
DNA (1638bp) protein (546aa)
major facilitator transporter n=1 Tax=Microbacterium sp. B19 RepID=UPI0003477202
Multidrug MFS transporter {ECO:0000313|EMBL:KEP74802.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
permease of the major facilitator superfamily
cn_combo_scaffold_1301_53
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(56686..57357)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E9C5F2
Membrane carboxypeptidase {ECO:0000313|EMBL:GAD33670.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
membrane carboxypeptidase
cn_combo_scaffold_1301_54
Streptomyces tsukubaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(57425..58447)
DNA (1023bp) protein (341aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI000373CBE1
Iron ABC transporter ATpase {ECO:0000313|EMBL:EIF93403.1}; TaxID=1114943 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces tsukubaensis NRRL1
cn_combo_scaffold_1301_55
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(58444..59967)
DNA (1524bp) protein (508aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXS3_PSEUX
ABC transporter permease
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEA28729.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudono
Displaying items 31-59 of 59 in total

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