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cn_combo_scaffold_1301_55

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(58444..59967)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transporter, integral membrane subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXS3_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 498.0
  • Bit_score: 466
  • Evalue 4.10e-128
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 498.0
  • Bit_score: 466
  • Evalue 1.20e-128
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEA28729.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudono similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 498.0
  • Bit_score: 466
  • Evalue 5.80e-128

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1524
GCTCCCGCGCTGCTGGTGCTCGCGGCGGCCCTGGTCGCCGCCGCCGCGGCCGCGCCGCTGGTCCAGCTGCTGACACGGGTGGCCGGCGGCGGCACCGAGGCCGCGGCATCCGCGCTGCTGCGTCCGCGGACCGCGGACCTCCTCGTCGACACGCTCGCCTTGACGGCGACGGTCAGCGCCCTCGCGCTGGCGCTCGGCATCGCCCTCGCGACCGCTGCCGTCCGGGTGCGCCTTCCCGGCCGCCGGCTGTGGTGGATCGCCCTGTGCCTTCCGCTCGCGGTGCCGAGCTACGTCGGCGCCTTCGCGTGGACGGCGACCTGGCCGACGGTCGACGGTTTCTGGCCGCTGGTGATCGTGCTGACCCTGTGCACCGTGCCGTACGTGACGCTGCCGGCGATGGCGGCCCTGTCCACCCTCGACGACGGGCTGGTCGACGTCGCCCGCACCCTCGGCCGCGGGCGGGTGCGGGTCTACGTCACAGTGGTGCTCCCCCACGTCCTCCCGGCCGCGGCCGCCGGCGCCCTCCTGGTGGCGCTGTACGCACTGTCGGATTTCGGCGCACCCGCGATCCTCCGCGTCGAGACGCTCACGACGGGCGTCTACGCGCAGTTCAGCAGTGGATTCGACCGGACGCTGGCCGCCACCACGGCCCTGCTGCTCGCCGCCGTGGCCGTCGTGTGCGTCGCCGGCGAACGGCTCATCCGCCCGCGGACCGTGCGCACCCGGACCACCGCATCCGCCCGCCCCGCGGTGGAACTCGGCCGCGCGGGCACCGCCGCGACCATGACGGCCCTCGCCGTCGTCACCGCGGCGAGCGTGCTCTTCCCGGTCGTCGCGCTCGGCATCCGGATGCTCCGCAGCGACCGCTACGCCTCCACGCCGGTCGACCTCGCGGGGGCCCTGGGGACGACCGTCGGCATCTCGGCGCTCGCAGCGACCGTGGCGGTCGCCGTCGCCCTGCCGGTCAGCATCCTCGCCGCGCGCTACCGTGGCCCGCTCGTGACGGGCCTGGAGTCGGTGTCCTACCTCGGCCACGCCCTCCCCGGCGTGGTGGTCGCCCTGGCGCTGGTGACGCTCTCCCTGCAGTTCTTCCCCGGCGCCTACCAGAGCGCCCTCGTACTCCTCGCCGCCTACGGCATCCTGTTCCTGCCGAAGTCGATCGGCGCCTCCCGCGCAGCGATCGCGCAGGTCCCGGAAGAGCTCGAGGAGACCTCACGCACCCTCGGCCGCGGTCCGGTGCGCACGTGGCTGCGCGTCACGCTCCCCGGCGCGCTGCCCGGCATCCTCGCGGGATGGGTGCTCGTGGCCACCGCCGTCGCCAAGGAGCTGCCCGCCACTCTCATGCTCCGCCCCATCGGGTTCGACACGCTCGCCACCGAGCTGTGGAGCAAGACCTCGCTCGGCGCGTACGGCGCGGCAGCCCCCATCGGGGTGCTCCTGATCCTCGCCGGCATCGCACCCGCCCTCCTCCTCGCGCGCGGACTGGAGCGGCGCCGGACGACGTCCGGGAGAATGGCACCGTGA
PROTEIN sequence
Length: 508
APALLVLAAALVAAAAAAPLVQLLTRVAGGGTEAAASALLRPRTADLLVDTLALTATVSALALALGIALATAAVRVRLPGRRLWWIALCLPLAVPSYVGAFAWTATWPTVDGFWPLVIVLTLCTVPYVTLPAMAALSTLDDGLVDVARTLGRGRVRVYVTVVLPHVLPAAAAGALLVALYALSDFGAPAILRVETLTTGVYAQFSSGFDRTLAATTALLLAAVAVVCVAGERLIRPRTVRTRTTASARPAVELGRAGTAATMTALAVVTAASVLFPVVALGIRMLRSDRYASTPVDLAGALGTTVGISALAATVAVAVALPVSILAARYRGPLVTGLESVSYLGHALPGVVVALALVTLSLQFFPGAYQSALVLLAAYGILFLPKSIGASRAAIAQVPEELEETSRTLGRGPVRTWLRVTLPGALPGILAGWVLVATAVAKELPATLMLRPIGFDTLATELWSKTSLGAYGAAAPIGVLLILAGIAPALLLARGLERRRTTSGRMAP*