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cn_combo_scaffold_1919_27

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: 24228..24818

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NDF8_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 194.0
  • Bit_score: 309
  • Evalue 1.90e-81
rimM; RimM protein similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 194.0
  • Bit_score: 309
  • Evalue 5.40e-82
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 194.0
  • Bit_score: 309
  • Evalue 2.70e-81

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 591
GTGGCCGACGAGAAGACGCAGCTGCGGGTCGGTCGCCTGGTGAAGGCCCACGGCCTCAAAGGCGCTCTCAAGCTCGAGCTGTACACGGACGATCCCGAGGGTCGCTTCGCGCCGGGATCCACCTTCACCCTGCAGGTGCCCGAGTCATCGCCGTGGCACGGCAAGCCCCTCACGGTGCGGGAGTTCCGCTGGATGAACTCGCACCCCGTCGCCTTCTTCCAGGGCGTCGACGACCGAGACGCCGCCGAGGGCCTCGTCCGGGCGATCCTGTGGATCGATCAGCCGATCGATGCCCCCTCCGGCGATGACGACGCGTGGTACGACCACCAGCTGGTCGGGCTCAGTGTCGTCCGCGACGGAGACGTCATCGGGCGCGTCGCACGTGTCGATCACCTGCCCGCCCACGATCTCCTCGTCGTGACGCCGCACGGTACGGAAGACGAGGTCCTCGTCCCCTTCGTGTCGCAGATCGTCCCCGAGGTCGACATCGCATCCGGCCGTGTCGTCGTCACGCCGCCGCCCGGGCTGTTCGAAGAGCTCGCCGACGACGGCGCCACGGGCGATGCCGCCGCGTCCGACCCCTCCGACTGA
PROTEIN sequence
Length: 197
VADEKTQLRVGRLVKAHGLKGALKLELYTDDPEGRFAPGSTFTLQVPESSPWHGKPLTVREFRWMNSHPVAFFQGVDDRDAAEGLVRAILWIDQPIDAPSGDDDAWYDHQLVGLSVVRDGDVIGRVARVDHLPAHDLLVVTPHGTEDEVLVPFVSQIVPEVDIASGRVVVTPPPGLFEELADDGATGDAAASDPSD*