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cn_combo_scaffold_1919

Alias: MIC18_53

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1919_1
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..829
DNA (828bp) protein (276aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|SAAS:SAAS00085344};; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbac
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Microbacterium yannicii RepID=UPI00030BC8D5
UDP-N-acetylglucosamine enolpyruvyl transferase
cn_combo_scaffold_1919_2
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

829..1596
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003750721
Contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIP88143.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp.
1-acyl-sn-glycerol-3-phosphate acyltransferase
cn_combo_scaffold_1919_3
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1586..2722
DNA (1137bp) protein (379aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
glycerol-3-phosphate dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000367B047
gpsA; glycerol-3-phosphate dehydrogenase
cn_combo_scaffold_1919_4
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2700..3716
DNA (1017bp) protein (339aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
ddl; D-alanine-D-alanine ligase (EC:6.3.2.4)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036CD92E
cn_combo_scaffold_1919_5
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3717..4205)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2X6I5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAD33101.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
cn_combo_scaffold_1919_6
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4229..5218
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00030B2087
Thiamine-monophosphate kinase {ECO:0000313|EMBL:KHK97481.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
thiamine monophosphate kinase
cn_combo_scaffold_1919_7
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5191..5787)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000368583F
N6-adenine-specific methylase {ECO:0000313|EMBL:GAD33099.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
N6-adenine-specific methylase
cn_combo_scaffold_1919_8
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5852..6439
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002FBB40A
Uncharacterized protein {ECO:0000313|EMBL:KEP74997.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
DnaJ-class molecular chaperone
cn_combo_scaffold_1919_9
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6481..8694
DNA (2214bp) protein (738aa)
ATP-dependent DNA helicase RecG n=1 Tax=Microbacterium yannicii RepID=UPI000300301A
recG; RecG-like helicase
RecG-like helicase {ECO:0000313|EMBL:BAJ76203.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).
cn_combo_scaffold_1919_10
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8721..9263
DNA (543bp) protein (181aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyr
phosphopantetheine adenylyltransferase n=1 Tax=Microbacterium RepID=UPI0003606401
coaD; phosphopantetheine adenylyltransferase
cn_combo_scaffold_1919_11
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9256..9798
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D4E7A5
Uncharacterized protein {ECO:0000313|EMBL:EXJ52717.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
metal-binding, possibly nucleic acid-binding protein
cn_combo_scaffold_1919_12
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


9832..10041
DNA (210bp) protein (70aa)
50S ribosomal protein L32 n=1 Tax=Microbacterium yannicii RepID=UPI0002D7C618
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
rpmF; 50S ribosomal protein L32
cn_combo_scaffold_1919_13
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10076..10747
DNA (672bp) protein (224aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule
ribonuclease III n=1 Tax=Microbacterium yannicii RepID=UPI0002DB5D3B
rnc; dsRNA-specific ribonuclease
cn_combo_scaffold_1919_14
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10740..11657
DNA (918bp) protein (306aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003731035
formamidopyrimidine-DNA glycosylase
cn_combo_scaffold_1919_15
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11670..12764)
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037B6BD2
Histone acetyltransferase HPA2 {ECO:0000313|EMBL:GAD33091.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
histone acetyltransferase HPA2
cn_combo_scaffold_1919_16
unknown

Not on your lists

comp(12797..12913)
DNA (117bp) protein (39aa)

This feature has no annotations

cn_combo_scaffold_1919_17
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13300..16791
DNA (3492bp) protein (1164aa)
chromosome segregation protein SMC n=1 Tax=Microbacterium yannicii RepID=UPI0002E368BE
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral
smc; chromosome segregation ATPase
cn_combo_scaffold_1919_18
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16826..17698
DNA (873bp) protein (291aa)
cell division protein FtsY n=1 Tax=Microbacterium yannicii RepID=UPI0002FF7231
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Micr
ftsY; signal recognition particle GTPase
cn_combo_scaffold_1919_19
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17757..18257
DNA (501bp) protein (167aa)
galactose-1-phosphate uridylyltransferase n=1 Tax=Microbacterium yannicii RepID=UPI0002DD63B2
galactose-1-phosphate uridyltransferase
Galactose-1-phosphate uridyltransferase {ECO:0000313|EMBL:BAJ76214.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testac
cn_combo_scaffold_1919_20
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18303..19325)
DNA (1023bp) protein (341aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
radical SAM protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000381E759
lipA; lipoate synthase
cn_combo_scaffold_1919_21
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19322..19960)
DNA (639bp) protein (213aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000
octanoyltransferase n=1 Tax=Microbacterium yannicii RepID=UPI00036904FB
lipB; lipoate-protein ligase B
cn_combo_scaffold_1919_22
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20086..20631
DNA (546bp) protein (182aa)
Transcriptional regulator n=1 Tax=Microbacterium sp. TS-1 RepID=U2YQM7_9MICO
Transcriptional regulator {ECO:0000313|EMBL:GAD33083.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
transcriptional regulator
cn_combo_scaffold_1919_23
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


20644..22194
DNA (1551bp) protein (517aa)
signal recognition particle n=1 Tax=Microbacterium yannicii RepID=UPI0002D512ED
ffh; signal recognition particle GTPase
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteri
cn_combo_scaffold_1919_24
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22206..23315)
DNA (1110bp) protein (370aa)
Putative glutamate--cysteine ligase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=162
carboxylate-amine ligase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B5C5BC
hypothetical protein
cn_combo_scaffold_1919_25
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


23576..23989
DNA (414bp) protein (138aa)
30S ribosomal protein S16 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NDF6_MICTS
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
rpsP; ribosomal protein S16
cn_combo_scaffold_1919_26
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23995..24225
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000367D1BD
UPF0109 protein LK09_12185 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
RNA-binding protein
cn_combo_scaffold_1919_27
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24228..24818
DNA (591bp) protein (197aa)
Ribosome maturation factor RimM n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NDF8_MICTS
rimM; RimM protein
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" so
cn_combo_scaffold_1919_28
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24832..25509
DNA (678bp) protein (226aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N1)-methyltransferase n=1 Tax=Microbacteriaceae RepID=UPI000375863A
trmD; tRNA (guanine-N(1)-)-methyltransferase
cn_combo_scaffold_1919_29
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25529..26311)
DNA (783bp) protein (261aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=2 Tax=Microbacterium RepID=H8E4F6_9MICO
methionine aminopeptidase
cn_combo_scaffold_1919_30
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26433..26936
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003811AEB
Uncharacterized protein {ECO:0000313|EMBL:KJL35319.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
permease of the major facilitator superfamily
Displaying items 1-30 of 32 in total

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