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cn_combo_scaffold_2039_29

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(25358..25957)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigK n=1 Tax=Microbacterium sp. 292MF RepID=UPI000363409D similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 198.0
  • Bit_score: 326
  • Evalue 1.50e-86
RNA polymerase sigma factor SigK {ECO:0000313|EMBL:CDK01677.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 200.0
  • Bit_score: 327
  • Evalue 1.70e-86
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 198.0
  • Bit_score: 304
  • Evalue 1.80e-80

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Taxonomy

Microbacterium sp. C448 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGCTTGACCCCATGGTCATCGACGGTGTGGAAGTCCCCGAAGACGGCGCACCCGTCGATCACGTGGGCGAGATGCTCGTCCGCGTCGCAGCGGGGGATCAGGGGGCGTTCGCGCGCGTGTACGACATGCTCTCCCCGCGCGTGTTCGGCCTCATCCTCCGTGTCCTCGTCGATCGGTCGCAGAGCGAGGAAGTGCTGCAGGAGGTCTTCCTGGAAGTGTGGCAATCCGCCGCGCGGTTCGCTCCGAACAAAGGCCAAGGGAGAACGTGGGTTCTCACGATCGCCCATCGCCGGGCGGTGGATCGCGTGCGAGCGTCGCAAGCGAGCACCGATCGCGATGTGCGGGTGGGGTTCCGTGATCTCGACGTCGCGTACGACGGCGTGGCCGAACAGGCGCAACTGCGCATCGAAGGCCGCCAGGTCGCCACGGCGTTGAAAACCCTCCCCGACCCGCAGCGCGAAGCCCTCACCCTCGCGTACTACGGGGGATACAGCCAAAGCGAGATCGCGGCACTGGTGGGAGCGCCGCTGGGGACGATCAAGACCAGGATGCGCGACGGATTGACGCGCCTACGGGCAGAGATGGGGGTGACGGTGTGA
PROTEIN sequence
Length: 200
MLDPMVIDGVEVPEDGAPVDHVGEMLVRVAAGDQGAFARVYDMLSPRVFGLILRVLVDRSQSEEVLQEVFLEVWQSAARFAPNKGQGRTWVLTIAHRRAVDRVRASQASTDRDVRVGFRDLDVAYDGVAEQAQLRIEGRQVATALKTLPDPQREALTLAYYGGYSQSEIAALVGAPLGTIKTRMRDGLTRLRAEMGVTV*