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cn_combo_scaffold_2039

Alias: MIC18_60

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2039_1
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..283)
DNA (282bp) protein (94aa)
NAD-dependent epimerase n=1 Tax=Microbacterium yannicii RepID=UPI000319A441
NADH-flavin reductase {ECO:0000313|EMBL:GAD35306.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
NADH-flavin reductase
cn_combo_scaffold_2039_2
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(375..1379)
DNA (1005bp) protein (335aa)
Putative TrmH family tRNA/rRNA methyltransferase {ECO:0000313|EMBL:KJL23359.1}; EC=2.1.1.- {ECO:0000313|EMBL:KJL23359.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriace
RNA methyltransferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034680D9
rRNA methylase
cn_combo_scaffold_2039_3
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1372..2772)
DNA (1401bp) protein (467aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
Cysteine--tRNA ligase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5Y6_9MICO
cysS; cysteinyl-tRNA synthetase
cn_combo_scaffold_2039_4
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2827..3750
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00038024F3
Uncharacterized protein {ECO:0000313|EMBL:CDJ99525.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
cn_combo_scaffold_2039_5
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3817..4302
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D96B0D
histone acetyltransferase HPA2
Acetyltransferase {ECO:0000313|EMBL:KEP74638.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
cn_combo_scaffold_2039_6
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4309..5526)
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000378A855
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" sou
ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
cn_combo_scaffold_2039_7
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5554..6036)
DNA (483bp) protein (161aa)
CarD family transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003656E3D
RNA polymerase-binding transcription factor CarD {ECO:0000313|EMBL:CDK01704.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacter
CarD family transcriptional regulator
cn_combo_scaffold_2039_8
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6183..6701
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00030456BE
DNA modification methylase
DNA modification methylase {ECO:0000313|EMBL:BAJ75695.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain S
cn_combo_scaffold_2039_9
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6766..7449)
DNA (684bp) protein (228aa)
XRE family transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003764A97
XRE family transcriptional regulator {ECO:0000313|EMBL:EQM81611.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypi
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
cn_combo_scaffold_2039_10
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7446..8681)
DNA (1236bp) protein (412aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" sour
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E72B45
signal transduction histidine kinase
cn_combo_scaffold_2039_11
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8849..9541
DNA (693bp) protein (231aa)
PhoU family transcriptional regulator n=1 Tax=Microbacterium yannicii RepID=UPI0002E350B1
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
phoU; phosphate uptake regulator
cn_combo_scaffold_2039_12
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9607..10383)
DNA (777bp) protein (259aa)
phosphoglyceromutase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000367630C
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};;
gpmA; phosphoglycerate mutase 1
cn_combo_scaffold_2039_13
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10436..11260
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036B6481
Methylase {ECO:0000313|EMBL:KIC60046.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
cn_combo_scaffold_2039_14
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11278..12432)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2YQL9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAD35324.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
cn_combo_scaffold_2039_15
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12429..13541)
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031CB47D
Folate-binding protein YgfZ {ECO:0000313|EMBL:EZP25270.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
aminomethyltransferase
cn_combo_scaffold_2039_16
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13541..14137)
DNA (597bp) protein (199aa)
fatty acid-binding protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D48C62
UPF0678 fatty acid-binding protein-like protein RM52_01130 {ECO:0000256|HAMAP-Rule:MF_01297}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source
hypothetical protein
cn_combo_scaffold_2039_17
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14148..14261)
DNA (114bp) protein (38aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E5Z9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07596.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.
cn_combo_scaffold_2039_18
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14271..14579)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B538F2
Putative membrane protein {ECO:0000313|EMBL:EZP25267.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
hypothetical protein
cn_combo_scaffold_2039_19
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14687..15385
DNA (699bp) protein (233aa)
transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003666186
Transcriptional regulator domain-containing protein {ECO:0000313|EMBL:EIC07598.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbac
glnR; response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
cn_combo_scaffold_2039_20
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15429..17597
DNA (2169bp) protein (723aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
polyphosphate kinase n=1 Tax=Microbacterium yannicii RepID=UPI0002F85EAB
ppk; polyphosphate kinase
cn_combo_scaffold_2039_21
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17594..18532
DNA (939bp) protein (313aa)
DNA mismatch repair protein MutT n=1 Tax=Microbacterium sp. 292MF RepID=UPI000366473D
DNA mismatch repair protein MutT {ECO:0000313|EMBL:KIC60039.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
NTP pyrophosphohydrolase including oxidative damage repair enzyme
cn_combo_scaffold_2039_22
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18708..19826
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003088DA1
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
pstS; phosphate ABC transporter substrate-binding protein
cn_combo_scaffold_2039_23
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19900..20838
DNA (939bp) protein (313aa)
phosphate ABC transporter permease n=1 Tax=Microbacterium yannicii RepID=UPI00037AB79E
Phosphate transport system permease protein PstC 2 {ECO:0000313|EMBL:CDK01684.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbact
pstC; phosphate ABC transporter permease
cn_combo_scaffold_2039_24
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20840..21946
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E9EBBB
ABC transporter, permease protein {ECO:0000313|EMBL:CDK01683.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
phosphate ABC transporter permease
cn_combo_scaffold_2039_25
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21985..22764
DNA (780bp) protein (260aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
phosphate ABC transporter ATP-binding protein n=1 Tax=Microbacterium yannicii RepID=UPI00030149A2
phosphate ABC transporter ATPase
cn_combo_scaffold_2039_26
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22774..23661)
DNA (888bp) protein (296aa)
branched-chain amino acid aminotransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI000349DF5B
Branched-chain amino acidaminotransferase/4-amino-4-deoxychorismate lyase {ECO:0000313|EMBL:GAD35336.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacteri
branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
cn_combo_scaffold_2039_27
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23831..24469)
DNA (639bp) protein (213aa)
DNA-directed RNA polymerase subunit beta n=1 Tax=Microbacterium yannicii RepID=UPI00037A2B1B
DNA-directed RNA polymerase, beta subunit/140 kD subunit
DNA-directed RNA polymerase, beta subunit/140 kD subunit {ECO:0000313|EMBL:BAJ75674.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Micr
cn_combo_scaffold_2039_28
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24522..25361)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031E0440
Uncharacterized protein {ECO:0000313|EMBL:CDK01678.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
cn_combo_scaffold_2039_29
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25358..25957)
DNA (600bp) protein (200aa)
RNA polymerase sigma factor SigK n=1 Tax=Microbacterium sp. 292MF RepID=UPI000363409D
RNA polymerase sigma factor SigK {ECO:0000313|EMBL:CDK01677.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
cn_combo_scaffold_2039_30
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26154..26819
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D884D1
Cell surface lipoprotein MPB83 {ECO:0000313|EMBL:CDK01676.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
secreted/surface protein with fasciclin-like repeats
Displaying items 1-30 of 35 in total

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