name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_biofilm_scaffold_4253_1
unknown
|
Not on your lists |
26..556
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_4253_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
553..2064
|
Cell wall hydrolase/autolysin n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE94_NIAKG
cell wall hydrolase/autolysin
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:AEV97285.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
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berkeley_reactor_200306_biofilm_scaffold_4253_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(2058..3302)
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Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE92_NIAKG
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000313|EMBL:KIC95081.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Phosphoribosylformylglycinamidine cyclo-ligase
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berkeley_reactor_200306_biofilm_scaffold_4253_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
3316..4302
|
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Riboflavin biosynthesis protein RibF n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE91_NIAKG
riboflavin biosynthesis protein RibF
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berkeley_reactor_200306_biofilm_scaffold_4253_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
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Not on your lists |
comp(4344..5342)
|
DNA polymerase III, delta subunit {ECO:0000313|EMBL:AEV97281.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AEV97281.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
DNA polymerase III, delta subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE90_NIAKG
DNA polymerase III subunit delta
|
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berkeley_reactor_200306_biofilm_scaffold_4253_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
5535..6515
|
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE88_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97279.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
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berkeley_reactor_200306_biofilm_scaffold_4253_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(6584..10126)
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Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE87_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:AEV97278.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein
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berkeley_reactor_200306_biofilm_scaffold_4253_8
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(10364..11986)
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ABC transporter related n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL22_CHIPD
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACU63932.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
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berkeley_reactor_200306_biofilm_scaffold_4253_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(12011..12775)
|
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE82_NIAKG
succinate dehydrogenase and fumarate reductase iron-sulfur protein
Succinate dehydrogenase and fumarate reductase iron-sulfur protein {ECO:0000313|EMBL:AEV97273.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
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berkeley_reactor_200306_biofilm_scaffold_4253_10
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(12788..13201)
|
Uncharacterized protein n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T1P3_META2
Uncharacterized protein {ECO:0000313|EMBL:GAO41817.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
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berkeley_reactor_200306_biofilm_scaffold_4253_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria
|
Not on your lists |
comp(13204..13656)
|
id=14424842 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
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berkeley_reactor_200306_biofilm_scaffold_4253_12
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(13674..15641)
|
Succinate dehydrogenase {ECO:0000313|EMBL:KIC90019.1}; EC=1.3.5.1 {ECO:0000313|EMBL:KIC90019.1};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE81_NIAKG
succinate dehydrogenase or fumarate reductase, flavoprotein subunit
|
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berkeley_reactor_200306_biofilm_scaffold_4253_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(15677..16366)
|
Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE80_NIAKG
succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family
Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family {ECO:0000313|EMBL:AEV97271.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
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berkeley_reactor_200306_biofilm_scaffold_4253_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
16649..17560
|
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE79_NIAKG
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta
|
|
berkeley_reactor_200306_biofilm_scaffold_4253_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria
|
Not on your lists |
17574..18029
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003647741
SsrA-binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
|
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berkeley_reactor_200306_biofilm_scaffold_4253_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
18135..19229
|
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE77_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97268.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
|
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berkeley_reactor_200306_biofilm_scaffold_4253_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(19346..21868)
|
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000313|EMBL:AEV97267.1}; EC=5.99.1.3 {ECO:0000313|EMBL:AEV97267.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE76_NIAKG
DNA topoisomerase
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berkeley_reactor_200306_biofilm_scaffold_4253_18
Halobacillus sp. BBL2006, Halobacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
comp(21910..22296)
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003668E21
Uncharacterized protein {ECO:0000313|EMBL:KHE72466.1}; TaxID=1543706 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Halobacillus.;" source="Halobacillus sp. BBL2006.;"
hypothetical protein
|
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berkeley_reactor_200306_biofilm_scaffold_4253_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(22293..22673)
|
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE75_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97266.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
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berkeley_reactor_200306_biofilm_scaffold_4253_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(22687..23526)
|
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE74_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97265.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
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berkeley_reactor_200306_biofilm_scaffold_4253_21
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(23523..25412)
|
DNA topoisomerase type IIA subunit B region 2 domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE73_NIAKG
DNA topoisomerase IV subunit B {ECO:0000313|EMBL:KIC91755.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
DNA topoisomerase type IIA subunit B domain-containing protein
|
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berkeley_reactor_200306_biofilm_scaffold_4253_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
25607..27049
|
ABC transporter related protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE72_NIAKG
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:AEV97263.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
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berkeley_reactor_200306_biofilm_scaffold_4253_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
27310..27627
|
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE70_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97261.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
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berkeley_reactor_200306_biofilm_scaffold_4253_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
27996..28265
|
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6T9_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97942.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
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berkeley_reactor_200306_biofilm_scaffold_4253_25
unknown
|
Not on your lists |
comp(28266..28931)
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_4253_26
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
29071..31017
|
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
DNA primase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR55_NIAKG
DNA primase
|
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berkeley_reactor_200306_biofilm_scaffold_4253_27
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria
|
Not on your lists |
comp(31060..31632)
|
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B5B989
Uncharacterized protein {ECO:0000313|EMBL:KIF26522.1}; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU210001.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_4253_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria
|
Not on your lists |
comp(31763..32272)
|
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR56_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
|
|
berkeley_reactor_200306_biofilm_scaffold_4253_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(32445..33122)
|
Glycerol-3-phosphate acyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR59_NIAKG
Glycerol-3-phosphate acyltransferase
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
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berkeley_reactor_200306_biofilm_scaffold_4253_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(33196..34014)
|
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Ribosomal protein L11 methyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR60_NIAKG
(LSU ribosomal protein L11P)-lysine N-methyltransferase
|