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berkeley_reactor_200306_biofilm_scaffold_6339_1

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 550..1821

Top 3 Functional Annotations

Value Algorithm Source
RNA-directed DNA polymerase (Reverse transcriptase) n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8VXL4_DESAS similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 419.0
  • Bit_score: 572
  • Evalue 3.40e-160
Transposase {ECO:0000313|EMBL:KJS12094.1}; TaxID=1629715 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c8a.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 415.0
  • Bit_score: 575
  • Evalue 5.70e-161
RNA-directed DNA polymerase similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 419.0
  • Bit_score: 572
  • Evalue 9.70e-161

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Taxonomy

Peptococcaceae bacterium BRH_c8a → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1272
TTGCAGGAACTGAGAAGGAAGATATACATAAAGGCGAAAGCTGAAAAGGCTCACCGTTTCTGGGGACTGTATGTACATGTGTGCAAGGAAAATACCCTGATGGAATCCTATCGGATGGTCAAGAAAAACAATGGAGCACCGGGTATAGATGGAATGACCTTCGATGATGTTGAACAATCAGGTGTAGAAGGCTTTATACATGGCATACACCAAGAACTAATCAATGGCTCTTACGAACCTTCCCGAAACAGGATTAAAGAGATACCTAAAGCAAATGGTAAAACTCGAAAGCTGGGTATAGCTACGATCAAAGACCGGGTAGTACAAGGAGCAGTGAAGTTGATTGTGGAACCAATATTTGAAACAGACTTTCAGAATGGTTCTTATGGATACCGTCCAAAGCGAACAGCTCACCAGGCGATAGAAAGGGTAGCAGAAGCTGTTGTCAAGGAAAAGACAAGGGTAATAGATTTAGACCTGCGCGCTTATTTTGATACAGTAAAGCATCATATTCTGTTAAATAAAATAGCAAAGCGGATAGCAGACGACAAGATTATGAGACTGTTGAAACAAATGCTGAAAGCGGGAGGTAAAGAAGGAGTTCCTCAAGGCTCAGTTCTTTCACCGTTATTGAGCAACATCTACCTTAATGACGTGGACAAAATGCTTGAAAAAGCAAAAGAGACCACTCGGGAAGGGAAATACACGCATCTTGAATATGCACGATTTGCTGATGACTGTGTAATATTAATAGACGGTCATCATAAATGGGACTGGCTATGGAATGGTGTTAACAGAAGGCTACGGGAAGAACTGGGCAAGCTGGAGGTGTACATCAATGAAGAAAAGACGAAACAACTGGATTTAGTCAAAGGAGATAGTTTTGGCTTTTTGGGTTTTGACTTTAGGAGACTAAGGACAAAGGCAAAGAAATGGCGGGTAAACTATCAACCTAAGATGCAGGCCAGAGTTAAAGTGATGGACAAGATCAGAGATGTGTTTAAACGCCACGAATCACAACCACTGACAAGGGTAAGAGACATTATCAATCCAATACTTAAAGGCTGGGTGCAATATTTTAAAATAGGCAACTCAAGCAAGGTGTTCGGATACGTAAAAGATTGGTTAACCAGGAAAATCCGGAGGCACTTAATGAAAGCCAAAGGAAAGCAGGGCTTTGGTTGGACTCTGTGGAGTACAAAGGGGCTGTATGCTATGTATAACATATATAGCAATTTTAAAGTGTCCCCGCGGAAAATAGCCCCAACATGA
PROTEIN sequence
Length: 424
LQELRRKIYIKAKAEKAHRFWGLYVHVCKENTLMESYRMVKKNNGAPGIDGMTFDDVEQSGVEGFIHGIHQELINGSYEPSRNRIKEIPKANGKTRKLGIATIKDRVVQGAVKLIVEPIFETDFQNGSYGYRPKRTAHQAIERVAEAVVKEKTRVIDLDLRAYFDTVKHHILLNKIAKRIADDKIMRLLKQMLKAGGKEGVPQGSVLSPLLSNIYLNDVDKMLEKAKETTREGKYTHLEYARFADDCVILIDGHHKWDWLWNGVNRRLREELGKLEVYINEEKTKQLDLVKGDSFGFLGFDFRRLRTKAKKWRVNYQPKMQARVKVMDKIRDVFKRHESQPLTRVRDIINPILKGWVQYFKIGNSSKVFGYVKDWLTRKIRRHLMKAKGKQGFGWTLWSTKGLYAMYNIYSNFKVSPRKIAPT*