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berkeley_reactor_200306_biofilm_scaffold_107365

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_biofilm_scaffold_107365_1
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(192..1067)
DNA (876bp) protein (292aa)
Putative transcriptional regulator, IclR family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HX27_BORPD
IclR family transcriptional regulator
Putative transcriptional regulator, IclR family {ECO:0000313|EMBL:CAP43701.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
berkeley_reactor_200306_biofilm_scaffold_107365_2
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1094..1972)
DNA (879bp) protein (293aa)
Putative transcriptional regulator, IclR family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HX27_BORPD
IclR family transcriptional regulator {ECO:0000313|EMBL:KDM66098.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
IclR family transcriptional regulator
berkeley_reactor_200306_biofilm_scaffold_107365_3
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1985..2929)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F6D7_9RHIZ
3-keto-5-aminohexanoate cleavage protein {ECO:0000313|EMBL:KHJ54078.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
hypothetical protein
berkeley_reactor_200306_biofilm_scaffold_107365_4
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3190..4128)
DNA (939bp) protein (313aa)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ESW80424.1}; EC=1.1.1.35 {ECO:0000313|EMBL:ESW80424.1};; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
UPI0003CE84F7 related cluster n=1 Tax=unknown RepID=UPI0003CE84F7
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
berkeley_reactor_200306_biofilm_scaffold_107365_5
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4156..4977)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00035D50D3
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:KDB02360.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
short-chain dehydrogenase/reductase SDR
berkeley_reactor_200306_biofilm_scaffold_107365_6
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4996..5748)
DNA (753bp) protein (251aa)
UPI0003CDEBB3 related cluster n=1 Tax=unknown RepID=UPI0003CDEBB3
ABC transporter permease {ECO:0000313|EMBL:ESW80422.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
inner-membrane translocator
Displaying 6 items

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