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berkeley_reactor_200306_biofilm_scaffold_2007_6

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(7072..7767)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IF71_METNO similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 214.0
  • Bit_score: 219
  • Evalue 1.80e-54
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 214.0
  • Bit_score: 219
  • Evalue 5.10e-55
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACL55782.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 214.0
  • Bit_score: 219
  • Evalue 2.50e-54

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Taxonomy

Methylobacterium nodulans → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGAAAACGGGCCAAACCTTGCCGGACGCGTTCGAGACCAGTCCCCGCCTCGTCAGCCTGTACGCCCAGCCCCATGGCGACGGCGAGACCACCGGCTGGCACAGCCACGAGCGCGGGCAGCTCCTGGCCGCCGCGCGCGGGCTGATGGTCGCCACGACAGCAGTGGGCGCCTGGTACGTGCCGGCGGACCACGCCCTGTGGATCCCGCCCGGCGTGGCGCATGATGTCGCCATGCGCGGTCCGGTCTGGATGACGAGCGCCTACGTCGCCCCGCCTGCGGCCCTCGGCCTGCCCCATGGCTGCAAGGTGCTGGCCGTCTCGCCGCTGCTGCGTGCGGCGATCGCGGCGCTGGCCGGCGAGCCGCCGCTCTACGACGAGGCCGGGCGGGGCGGCCACCTCGCCGCCCTGATCGTCGACGAGATCGGCCGTGCGGCGGATGCGGCCCTCGCCTTGCCCATGCCGTCCGACCGTCGGCTCGTCCGGCTCTGCCACGCCCTGATGGCGGCGCCGCAGATGCGCCGCGGGCTCGATGCGCTGGCCGAGGCCGCCGGCATGAGCCGGCGCAGCCTGACCCGACATTTCCGGGCCGAGACCGGGCTGTCGGTGCTGGCCTGGCGCCGGCGGGCCCGCGTCCTGGCGGCGCTCGGGCCCCCGCGCCGGGCGCTCACGCCGGGCTTGCCACCGCCTCCCGGGTGA
PROTEIN sequence
Length: 232
MKTGQTLPDAFETSPRLVSLYAQPHGDGETTGWHSHERGQLLAAARGLMVATTAVGAWYVPADHALWIPPGVAHDVAMRGPVWMTSAYVAPPAALGLPHGCKVLAVSPLLRAAIAALAGEPPLYDEAGRGGHLAALIVDEIGRAADAALALPMPSDRRLVRLCHALMAAPQMRRGLDALAEAAGMSRRSLTRHFRAETGLSVLAWRRRARVLAALGPPRRALTPGLPPPPG*