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berkeley_reactor_200306_biofilm_scaffold_2007_15

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 16237..17412

Top 3 Functional Annotations

Value Algorithm Source
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 384.0
  • Bit_score: 563
  • Evalue 1.20e-157
malate--CoA ligase subunit beta n=1 Tax=Paracoccus sp. N5 RepID=UPI0003732A7B similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 390.0
  • Bit_score: 565
  • Evalue 2.30e-158
malate--CoA ligase, beta subunit similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 384.0
  • Bit_score: 554
  • Evalue 1.50e-155

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Taxonomy

Roseibium sp. TrichSKD4 → Roseibium → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1176
ATGGACATCCACGAATACCAGGCCAAGGAGATCCTGGCCAAGTACGGCGTGCCGATCCCGCGCGGGGGCCTCGCCTACAGCGCCGAGCAGGCCGCCTACCGGGCCCGCGAGATCGGCGGCTCGGTCTGGGTGGTCAAGGCGCAGGTCCACACCGGCGGACGCGGCAAGGCCGGCGGGGTCAAGGTCGTGACCAGCGAGGATGCGGTCGAGGCGGCCGCCGAGGCCATGCTGGGGCGCAGGCTCGTCACCCCCCAGACCGGCCCCCAGGGCAAGGGCGTCTACCGGCTCTATATCGAAGGCGGCGTCGCCATCGGGCACGAGTTCTATCTCGGCTTCGTGCTCGACCGCGGCGAGCAGCGCGTCGCGGTGGTCGCCTCCCGCGAGGGCGGCATCGACATCGAGGAGATCGCGGCCGAGCGGCCGGACAGCCTGATCCGCCACTGCGTCGAGCCGGCTGTCGGCATGCAGGCCTTCCAGGCGCGGGAGATCGCCTTCGCCCTGGGCCTGCCGGCCGGCACGATCGCCGAGGCGACGCAGGTCATCCTGCGCTGCTACCGCGCCTTCCGCGACAAGGACGCCACGATGCTGGAGATCAACCCGCTGGTGCTGACCGCGGACAACCGCCTGCTGGCGCTCGATGCCAAGATGTCGTTCGACGACAACGCCCTGTTCCGCCATCCCGACATTTCCGAGCTGCGCGACAAGAGCCAGGAGGACCCGCGCGAGACCCAGGCCGCCGACCGGGGCCTGTCCTATGTCGGGCTCGACGGCGATGTCGGCTGCATCGTCAACGGCGCGGGCCTCGCCATGGCGACGATGGACATGATCAAGCTCGCCGGCGGAGAGCCGGCTAATTTCCTCGACATCGGCGGCGGCGCCACGCCCGAGCGGGTGGCCAAGGCCTTCCGCCTTGTGACGCAGGACAGGAACGTCAAGGTGGTGCTGGTCAACATCTTCGCCGGCATCAACCGCTGCGACTGGGTGGCGCAAGGCGTGGTCAAGGCGGTGGAGATCGCCGGGCTCGACCGCCCGCTGGTGGTGCGCCTGGCCGGCACGCATGTGGAGGAGGGCCGCCGGATCATCGCGGAGAGCGGCCTCTCCGTCATCGCCGCCACCACCCTGGCCGAGGCCGCACAACGGTCGGTCGAGGCCGCCCGACGCCAGCAGAGAGCCTGA
PROTEIN sequence
Length: 392
MDIHEYQAKEILAKYGVPIPRGGLAYSAEQAAYRAREIGGSVWVVKAQVHTGGRGKAGGVKVVTSEDAVEAAAEAMLGRRLVTPQTGPQGKGVYRLYIEGGVAIGHEFYLGFVLDRGEQRVAVVASREGGIDIEEIAAERPDSLIRHCVEPAVGMQAFQAREIAFALGLPAGTIAEATQVILRCYRAFRDKDATMLEINPLVLTADNRLLALDAKMSFDDNALFRHPDISELRDKSQEDPRETQAADRGLSYVGLDGDVGCIVNGAGLAMATMDMIKLAGGEPANFLDIGGGATPERVAKAFRLVTQDRNVKVVLVNIFAGINRCDWVAQGVVKAVEIAGLDRPLVVRLAGTHVEEGRRIIAESGLSVIAATTLAEAAQRSVEAARRQQRA*