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berkeley_reactor_200306_biofilm_scaffold_2007_19

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(18948..19850)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000379813D similarity UNIREF
DB: UNIREF100
  • Identity: 38.5
  • Coverage: 304.0
  • Bit_score: 180
  • Evalue 1.60e-42
Outer membrane protein/peptidoglycan-associated (Lipo)protein {ECO:0000313|EMBL:EJC70958.1}; Flags: Precursor;; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.2
  • Coverage: 304.0
  • Bit_score: 179
  • Evalue 6.40e-42
OmpA/MotB family outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 37.7
  • Coverage: 302.0
  • Bit_score: 177
  • Evalue 3.80e-42

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGCGCAGCACGCTCCTGATCGTCCTTGCCGCCGCGGGGGTTCACCTCGCGGCGGCGGTCCCCGCCCGGGCCGACTGCACGGCCCTGGACGGGGCGGTGAAGGCGGCGATCGCCAAGGGCGACATCGCCGCCCTGCCGGGCCTGGCCGACCGTATCTCCAAGGAGTCGTCCTGCGACGGCAGCTATGTCGAGGGGGCGCGGCGCTCGATCGCGCTCGCCTTCCTCAGCGTCGGCCAGAAGGAGGACGGCAGCTTCTCCCCCGAATATGTCGCCGGCGCCGCCGCCATCGCCCGGCCCTGGCAGGTGTCGATGGCCCTCGGCGACCTCAAGTACGACGCCAAGGATTATGCCGCCGCGGCCGGGGCCTACGAGGCGGCGATCAACGAGATCCGCAACGTCAAGCTGGTGCCGAAGGCGCCGCCGCGCGAGGTGGAGGACTATCTCGCCAAGCGCGCCTACCAGGCCAAGTCCCTGGCGCCGACCTATGTCGCCTCCCGGGGCTTCCGCGGCGAGGCCGCCGGCGTGATGGTGCCGACCTTCCGCAACTTCACCGCCGTCGCCGTGCCGGTGCCGATCCGCTTCGCCACCGACGAGGCGGTGCTGACCGACGACGGCCTGAAGGCGGTCGACGACCTCTACAACTATCTCAAGGGCCAGAGGCCCAAGACCGTCGTGCTGATCGGCCACACCGACGAGCGCGGCTCGGATGCCTACAACGACAAGCTTTCGCGGGCGCGGGCGGAAGCCGTGGCTGCGGTGCTCAAGCAGAAGGGCCTCGACTGCGCCATCGACGCCGAGGGCCACGGCAAGCACGAGCCGTTCGAGGCCGATGACCGCTCCAAATACAGCCAGGACGACCTCTACGCCTTCGATCGGCGCGTGGAGTTCAAGGTGGTGCAGTAG
PROTEIN sequence
Length: 301
MRSTLLIVLAAAGVHLAAAVPARADCTALDGAVKAAIAKGDIAALPGLADRISKESSCDGSYVEGARRSIALAFLSVGQKEDGSFSPEYVAGAAAIARPWQVSMALGDLKYDAKDYAAAAGAYEAAINEIRNVKLVPKAPPREVEDYLAKRAYQAKSLAPTYVASRGFRGEAAGVMVPTFRNFTAVAVPVPIRFATDEAVLTDDGLKAVDDLYNYLKGQRPKTVVLIGHTDERGSDAYNDKLSRARAEAVAAVLKQKGLDCAIDAEGHGKHEPFEADDRSKYSQDDLYAFDRRVEFKVVQ*