ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_7733_11

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 10536..11399

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3IFM2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 284.0
  • Bit_score: 397
  • Evalue 6.00e-108
Transcriptional regulator {ECO:0000313|EMBL:EPE97803.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 284.0
  • Bit_score: 397
  • Evalue 8.40e-108
transcriptional regulator, AraC family similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 285.0
  • Bit_score: 368
  • Evalue 1.10e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium grahamii → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 864
ATGCGCGAAATGCGATCCTATCGAGAAACGCTGACCCACGAGCCTGAAAGCTCCATCAGCCGCCTCAATCGCCGGCTCGACGAGTCCATCCCGTTTCAATGGCATCATCATCCGGAATACGAGCTGACGCTCACCCTCAACTCGCGCGGCAAGCGCTTTATCGGCGACCATGTCGGCGACTATGACGATGGCGATCTCGTCCTTGTCGGCCCGAACCTGCCCCACACCTGGTACTCCCGCGAAAAGATCGAGGACGGGAAGCCCCATGTCGCGCTCGTCGTCTGGTTCCATCCCGACCGGATCAGGCAGGTGACCCATGACTTCATCGAATTTCGCAGCATTGACGCAATGCTGGCCCGCGCCGGCCGCGGCCTGCGCTTCACGCCGGGTGCCGCCGCTCCGGTGCGGGAGCGGTTCGAGCGCCTGTTCTCAAGCCCACCGGTCGATCGGTTGCTGACGCTCCTCCACCTTCTGCATCATCTTGCCGGCGACGATGCGGAAGCGCTCGCGACGACCTCCGCCCTGATCGGCGCGCCGGCTCAGACGCGTGAGCGCATCGACCGCGTTCTGACCCATGTCCATGCGAATTACGCCCGGACGATCACGCTGGGCGAGCTTGCCGACCTGGCGGCTCTCAGCCAGTCGGGGTTGCACCGGCTCTTTCTCAAACATACCGGCAAGGCCGTATCGGACTATCTCGCCCATATGCGGATCGGCGATGCCTGCGCGCGCCTGTCGGGGACGACACAATCGATCGGCCACATCGCCGGCGCGGTCGGCTATGCCTCCCTGGCGAATTTCAATCGCCAGTTCCGCGCGCTGAAGCGCATGACGCCCAGGGACTATCGAAGATTGTTCGGCTGA
PROTEIN sequence
Length: 288
MREMRSYRETLTHEPESSISRLNRRLDESIPFQWHHHPEYELTLTLNSRGKRFIGDHVGDYDDGDLVLVGPNLPHTWYSREKIEDGKPHVALVVWFHPDRIRQVTHDFIEFRSIDAMLARAGRGLRFTPGAAAPVRERFERLFSSPPVDRLLTLLHLLHHLAGDDAEALATTSALIGAPAQTRERIDRVLTHVHANYARTITLGELADLAALSQSGLHRLFLKHTGKAVSDYLAHMRIGDACARLSGTTQSIGHIAGAVGYASLANFNRQFRALKRMTPRDYRRLFG*