ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_7733_13

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(12395..14911)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000379391A similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 835.0
  • Bit_score: 918
  • Evalue 3.00e-264
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 827.0
  • Bit_score: 907
  • Evalue 2.50e-261
Uncharacterized protein {ECO:0000313|EMBL:ADH91633.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 827.0
  • Bit_score: 907
  • Evalue 1.20e-260

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2517
ATGCTCGTCCAGCCTAAGTCCGCCGGCTGGAGCCGGATCCTTGCCGGCTACGCCCCGCCGGCCGGCGGGGCGGACGAGCTCGTCGACGGGCGGGGCCGGGTCCGCAGCCACTGGGCGCCTGTTCTCGCCGAGCTGGCTGCCGGCGGCGCGGCGGGCATGCGCCAGCGCTTCGCCCTCGCCGACCGGCACCTGAAGGATTCCGGCGTCTATTACCGGGTCTACGACGCCGATGGCGGCGGCGAGCGACCCTGGCCGCTGTCGCACCTGCCGCTGGTCATCCCGGCGGCGGAGTGGCGCGGCATCGAGGCCGGCGTGATCCAGCGCGCGCAGATCCTGGAGATGATCCTGGCCGATCTCTACGGCCCGGCGCGGCTGGTGCGCGAGGGCGCCTTGCCGGCCGCGGTCGTGGCCGGCAACCCGGACTTCCTGCGCCCGCTCGCCGGGGTGACGCAGCGCGGCGGCGAGGAGCTCCTGGTCTATGCCGTCGATCTCGGCCGCGCCCCGGACGGACGCTGGTGGGTGCTCGGCGACCGCTGCCAGGCGCCGTCGGGCATGGGCTATGCGGTGGAGAACCGCCTCGCCATATCGGCCGCGCTGCCGGCGCTCTACCGCGACATGCATGTCGAGCGCCTCGCCGGCTTCTTCCAGGCGCTGCGCAGCGGTCTCGCCGCCAAGTTCGGGCGCGAGGGCTCACGCATCGGCCTGCTCACCCCCGGCCCGGCCAACGAGACCTATTTCGAGCACGCCTATCTCGCCCGCTATCTCGGCTTCCTGCTGGTCGAGGGCGGCGACCTCACCGTGCAGGACAACGTCGTCTATGTCCGCACCATCGAAGGGTTGAAGCGCATCGACGTGCTGCTGCGCCGGCTCGACGCCGACTTCGCCGACCCGCTCGAGCTCACCGCGTCTTCGCGCATCGGCGTGCCCGGCCTGGTGCAGGCGGTGCGCGCCGGCTCGGTGACGCTCGCCAACAGCCTCGGCGCCGGGCTCCTGGAGGCGCGGGCCATGCTGGCCTTCATCCCGGCGCTGGCCCGCCGGCTGACCGGCGAGGAGCTCAAGCTGCCCAATGTCGCCACCTGGTGGTGCGGCGATCCCTCGGTGCGCGCCGAGGTGCTGGACCGTCTCGACCAGCGGGCCCTGGCGCCGGCCTTCTCCCGCCCGGTGCCCGGCCTGACGCGCGACGGGCCGACGCTCGCCGCCGAGCGCGACGAGGCCGGCCGCGCCGGGCTCGCGGCGGCGATCGAGAGCCATGCGCTCGACGTGGTGGCGCAGGACGTGATCCGCCTCGCCACCATGCCGGTCTGGACCGGCGAGCGGCTGGAGCCGCGCCCCTTCACGCTGCGGGTCTTCGCCGTCGCCACGCCCGAGGGCTGGCGGGTGATGCATGGCGGCTTCTGCCGCGTGGCCGAGGGCAGCGATGCCCGGGCGCTGTCCATGCAGCGCGGCGGCCGCTCCGCCGACGTCTGGATCGCCTCGGAGGGCCCGGTCGAGAAGGTGACGCTGCTGCCCCAGCCCGACCGCGTCGCCATCCGCCGCCGCCTCGGCCACCTGCCGAGCCGCGCCGCCGACAACCTGTTCTGGCTCGGGCGCTATCTCGAGCGGGCCGAGGGCACGCTGCGCGTGGTGCGTGCCCTCGCCGAGCTCTCGGTCGAGGCGCCCGACGAGACCGGCGAGGCGCCGGCGCGCCTTGCCAACCTGCTGATCTCCTGGGGCGCGGCGGCCGCGGACGACCAGGGCGCCGACACGCCCAAGAAGGTGCGGGCAACGCTCGGCAACAGCCTCGTCGTCGACATCGACGAGATGATCCGCCAGGCCTTCGAGGGCGACGGCAACGGCGCCATCCCGGTCCTGGTGCGCGCCGCCGGGCGCACCGCCTCGGTGATCCGCGAGCGGCTCTCGCCCGACGCCACCCGTGCCCTGGCGGATCTCGGCCACATCATCGAGGAGGAGCGCGACCTTTCCCCGGTGGACCGGGCCGACAAGGCCCTGCGCGTGCTCGCCGCCCTCTCGGGCCTCGCCCAGGAGAACATGAACCGCATCTCCGGCTGGCGCTTCATGCAGATCGGCAAGCGGATCGAGCGCGGCATCCTCACCTGCCGCCAGGCGCGCCGGCTCGCCGGGGAAGGCGCCTCGGAGGGCGCGCTCGACGCGCTGCTCAAGGTCACCGACAGCCGCATCACCTATCGCGCCCGCTACCTCATGGGCACGCTGCGCCTGCCGGTGCTCGACCTGGTGCTGCTCGACGACGGCAACCCGCGCTCCGTCGCCTTCCAGCTCGGGCGCCTGGCCGACCATCTCGCGCATCTGCCGGGCGTGGCGGCGGAGGGCGAGATCGACGCACCGGGCAAGACCATCCGCCTGCTCAGGGCCACCGTGGAGGTGAGCGAGGCGCAGGAGATCGACGAGGCGATGATCCTGTCGATCGAGAACCGGCTGCTGACCCTCTCCAACGAGGTCACCGCCCGCTATTTCGGCCAGGGCGAGGTGCCGGTCGAGACGACGGAGGGCCTGGGCTGA
PROTEIN sequence
Length: 839
MLVQPKSAGWSRILAGYAPPAGGADELVDGRGRVRSHWAPVLAELAAGGAAGMRQRFALADRHLKDSGVYYRVYDADGGGERPWPLSHLPLVIPAAEWRGIEAGVIQRAQILEMILADLYGPARLVREGALPAAVVAGNPDFLRPLAGVTQRGGEELLVYAVDLGRAPDGRWWVLGDRCQAPSGMGYAVENRLAISAALPALYRDMHVERLAGFFQALRSGLAAKFGREGSRIGLLTPGPANETYFEHAYLARYLGFLLVEGGDLTVQDNVVYVRTIEGLKRIDVLLRRLDADFADPLELTASSRIGVPGLVQAVRAGSVTLANSLGAGLLEARAMLAFIPALARRLTGEELKLPNVATWWCGDPSVRAEVLDRLDQRALAPAFSRPVPGLTRDGPTLAAERDEAGRAGLAAAIESHALDVVAQDVIRLATMPVWTGERLEPRPFTLRVFAVATPEGWRVMHGGFCRVAEGSDARALSMQRGGRSADVWIASEGPVEKVTLLPQPDRVAIRRRLGHLPSRAADNLFWLGRYLERAEGTLRVVRALAELSVEAPDETGEAPARLANLLISWGAAAADDQGADTPKKVRATLGNSLVVDIDEMIRQAFEGDGNGAIPVLVRAAGRTASVIRERLSPDATRALADLGHIIEEERDLSPVDRADKALRVLAALSGLAQENMNRISGWRFMQIGKRIERGILTCRQARRLAGEGASEGALDALLKVTDSRITYRARYLMGTLRLPVLDLVLLDDGNPRSVAFQLGRLADHLAHLPGVAAEGEIDAPGKTIRLLRATVEVSEAQEIDEAMILSIENRLLTLSNEVTARYFGQGEVPVETTEGLG*