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berkeley_reactor_200306_biofilm_scaffold_7733_16

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(19458..20372)

Top 3 Functional Annotations

Value Algorithm Source
pirin n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000376259E similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 304.0
  • Bit_score: 416
  • Evalue 2.30e-113
Pirin-related protein {ECO:0000313|EMBL:EYD74337.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 304.0
  • Bit_score: 425
  • Evalue 5.20e-116
pirin domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 304.0
  • Bit_score: 414
  • Evalue 1.90e-113

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Taxonomy

Rubellimicrobium mesophilum → Rubellimicrobium → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGTCGGTGCAGCCAGCCGAGGATCCGGCCCCGGGCGATGCCTTCGCCTGCGATGCCATCGAGACCGTCATCGTCGCCCGCTCGCGCGACCTCGGCGGCTTTGCCGTGCGCCGCGCCCTGCCGAGCGCCCGCCGGCGCATGGTCGGCCCCTTCATCTTCCTCGACCAGATGGGGCCGGCGACCTTCCGGCCGGGCGAGGCCTTCGACGTGCGGCCCCATCCGCATATCGGGCTGTCCACCGTCACCTATCTCTTCGACGGCGAGATCGTGCATCGCGACAGCCTCGGCACGTCAGAGGCGATCCGGCCGGGCGCCATCAACCTGATGACCGCCGGCCGCGGCATCGTCCATTCCGAGCGCACCGGCCTGGAGGCGCGGCGCAGCGGCTTCTCGATGATGGGCCTGCAGGCCTGGGTCGCCCTGCCGCGCGAGGCCGAGGAGGGCACGCCCTCCTTCGACCATTACGGCGCCGAGGCCATGCCGGAGCTCGCCGGCGAGGGCAAGCGGGTGCGCGTGCTGATGGGCTCGGCCTTCGGCCTCGCCGCCCCGGTGCGCACGGACTGGGAGACGCTCTATCTCGACGCCGCCCTGGAGCCCGGCGCCCGCCTGCCGCTCGACGCCGATTGCGAGGAGCGGGCGATCTATGTCGCCGCCGGCGAGATCGACATCGCCGGCGACGTCTTCGGCGTCGGCTCGCTGCTGATCCTGCGTCCCGGCGACCGCCTCACCGTCACCGCCGTGACATCAGCCCGTTTCGCCGTGCTCGGCGGCGCCACCATGGACGGCCCGCGCCACATCTGGTGGAACTTCGTCTCCTCGTCCCAGGAGCGCATCGAGCAGGCCAAGGCCGACTGGAAGCTCGGGCGCTTCGACACCGTGCCCGGCGATCCGGAATTCATTCCGCTGCCGGAATGA
PROTEIN sequence
Length: 305
MSVQPAEDPAPGDAFACDAIETVIVARSRDLGGFAVRRALPSARRRMVGPFIFLDQMGPATFRPGEAFDVRPHPHIGLSTVTYLFDGEIVHRDSLGTSEAIRPGAINLMTAGRGIVHSERTGLEARRSGFSMMGLQAWVALPREAEEGTPSFDHYGAEAMPELAGEGKRVRVLMGSAFGLAAPVRTDWETLYLDAALEPGARLPLDADCEERAIYVAAGEIDIAGDVFGVGSLLILRPGDRLTVTAVTSARFAVLGGATMDGPRHIWWNFVSSSQERIEQAKADWKLGRFDTVPGDPEFIPLPE*