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berkeley_reactor_200306_biofilm_scaffold_7733_24

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(26228..26665)

Top 3 Functional Annotations

Value Algorithm Source
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 139.0
  • Bit_score: 235
  • Evalue 4.80e-59
3-dehydroquinate dehydratase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UBQ9_METS4 similarity UNIREF
DB: UNIREF100
  • Identity: 83.5
  • Coverage: 139.0
  • Bit_score: 235
  • Evalue 3.40e-59
3-dehydroquinate dehydratase similarity KEGG
DB: KEGG
  • Identity: 83.5
  • Coverage: 139.0
  • Bit_score: 235
  • Evalue 9.60e-60

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Taxonomy

Methylobacterium sp. 4-46 → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 438
ATGCGCGAGATCGATGTCCTCAACGGACCCAACCTCAACCTGCTGGGCACACGCGAGCCCGGCATCTACGGCCGCCTGACGCTCGCCGACATCGAGGCTCAGCTCAAGGCCCGCGCGGGCGACCGGGCGACGCTCTCCTTCCGCCAGTCCAACCACGAGGGCGAGCTCGTCACCTGGATCCAGGAGGCCGGTGCCGCCGGCCGGGCAGTGATCCTCAATGCCGGGGCCTACACCCATACGTCGGTGGCGCTGCGCGACGCCATCTCCGGCGCCAAGGCCGAGGTGATCGAGGTGCATCTGTCCAACGTCCATGCCCGCGAGGAATTCCGCCACCATTCCTGGCTCTCGCCGGTCTGCATCGGCGTCATCGCCGGCTTCGGGCCGCTCTCCTACGCCCTGGCGCTGGAAGCGCTGCTCGAGAGGCAGCGGACGCCCTGA
PROTEIN sequence
Length: 146
MREIDVLNGPNLNLLGTREPGIYGRLTLADIEAQLKARAGDRATLSFRQSNHEGELVTWIQEAGAAGRAVILNAGAYTHTSVALRDAISGAKAEVIEVHLSNVHAREEFRHHSWLSPVCIGVIAGFGPLSYALALEALLERQRTP*