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berkeley_reactor_200306_biofilm_scaffold_7733_26

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(28113..29399)

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate transport system n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JHY8_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 428.0
  • Bit_score: 740
  • Evalue 9.60e-211
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 428.0
  • Bit_score: 740
  • Evalue 2.70e-211
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KEA08149.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 428.0
  • Bit_score: 740
  • Evalue 1.30e-210

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1287
ATGACCGTCGCCCTCCTGATCGGCAGCTTCTCGATGCTGCTGCTCATCGGCGTGCCCATCGCCTGGTGCATGGGCGTCGCCAGCCTGCTCGCCATCACCCTCGGCGGGCTCGGCCTGCCCCAGGCCTGGTTCGCCCAGCAGACCCTGCGCGGCGCCGACGCCATCACGCTGGCGGCGATCCCGCTCTTCCTCTTCGCCGGCGAGCTGATGAACCGCGGCGGCCTCACCGCCCGCATCATGCGGGTGGCCGAGCACATCTTCGGGCGCATCCGCGGCGGCCTCGGCCTGGTCAACGTCGCCACGGCGCTGGTCTATGGCGGCATCAGCGGCTCGGCCACCGCCGACACCGGCGCGGTCGGCTCGATCATGATCCCGGCCATGGCCGAGCGCGGCTATCCCAAGGCCTTCGCCGCGGCGGTCACGGCCGCCTCCGGCACGCTCGGCATCATCGGGCCGCAGAGCGTCATCCTGATCCTCTACGGCGTCCTGACCAACACCTCGATCGGCGGCCTCCTGGTGGCGGCGCTCATCCCGGGCGCCTTCATCGCCGTCACCTTCATGCTGACCTCCTACATCGTGGCGCGGCGTCACAACTTCCCGCGCAACGAGACGCCCGCCGCGGCCGGCACCATCGCGCGCGACGCGCTCGGCGCCCTGCCGGCGCTGCTGATGCCGGTGCTGGTGCTCGGCTCGATCATCGGCGGCATCGCCACCGCCACCGAGGCCTCGGCCATCGCCGTGGTCTACGCCTTCCTGGTCGGCACGCTGGTCTATCGCGAGCTGCCGCTCGCCGCGCTCTATCCCGCCGCGGCGGCCGCCGTCGCCACGACGGGCGTGATCATGATGATCATGGCGCTCGCCACGCCCTTCGGCTGGATCCTCACCGTCGAGCAGGTGCCGACCGCGGCGGCGAACTGGATCACCGGCCTGGAGACCTCGCACGCGGTCACCATCGCGCTGGTGCTGGTGCTCCTGAAGCTGGTCGGCTTCTGGCTCGACCTCGGCCCGGCCCTGATCATCCTGGCGCCGATCCTGGTGCCGATCGCCCTGAGCGCCGGGCTCAGCCCCTACCAGACCGGCGTGGTGTTCACCATGACGCTCGGCATCGGCCTGTTCACCCCGCCGATCGGCACCAACATCTTCGTCGTCTGCAACGTCGCCAAGATCGACATGTGGTCGGTCTCGGTGTGGCTGGTGCCCTACTGGATCGCCAGCGTGGTCTGCGTCATCGCCCTCGCCGCCTTCCCCGGCCTGACCGAGTGGCTCCCCCGCCTGTTTGGATTGTGA
PROTEIN sequence
Length: 429
MTVALLIGSFSMLLLIGVPIAWCMGVASLLAITLGGLGLPQAWFAQQTLRGADAITLAAIPLFLFAGELMNRGGLTARIMRVAEHIFGRIRGGLGLVNVATALVYGGISGSATADTGAVGSIMIPAMAERGYPKAFAAAVTAASGTLGIIGPQSVILILYGVLTNTSIGGLLVAALIPGAFIAVTFMLTSYIVARRHNFPRNETPAAAGTIARDALGALPALLMPVLVLGSIIGGIATATEASAIAVVYAFLVGTLVYRELPLAALYPAAAAAVATTGVIMMIMALATPFGWILTVEQVPTAAANWITGLETSHAVTIALVLVLLKLVGFWLDLGPALIILAPILVPIALSAGLSPYQTGVVFTMTLGIGLFTPPIGTNIFVVCNVAKIDMWSVSVWLVPYWIASVVCVIALAAFPGLTEWLPRLFGL*