ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_11784_4

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 1665..2795

Top 3 Functional Annotations

Value Algorithm Source
acetylornithine deacetylase ArgE (EC:3.5.1.16) similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 371.0
  • Bit_score: 466
  • Evalue 5.10e-129
Acetylornithine deacetylase {ECO:0000256|SAAS:SAAS00063950}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279026};; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00279018};; EC=3.5.1.16 {ECO:0000256|SAAS:SAAS00063953};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.6
  • Coverage: 371.0
  • Bit_score: 466
  • Evalue 2.50e-128
Acetylornithine deacetylase (ArgE) n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A3W8_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 371.0
  • Bit_score: 466
  • Evalue 1.80e-128

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1131
ATGACGGCGAAGCTCGTTTCCTTCGACACCGTCAGCGCCAGGTCCAACCTGCCGCTGATCGACTTCGTCGCCGACTACCTCGCCGCCCACGGCGTCGAGAGCATCCGCCTGCCGAACGCGGAGGGCGACAAGGCCGCCCTCTACGCCACCATCGGCCCGAAGGACCGGGGCGGGGTCTGCCTCTCCGGCCATGTCGACGTCGTGCCGGTGGAGGGCCAGGACTGGACGAGCCCACCCTTCGCCGCCACGGCGCGGGACGGGCGCCTCTACGGCCGCGGCACCTGCGACATGAAGGGCTTCGTCGCCACCGCGCTCGCCCTGGTGCCGGAGTTCCTCGCCGCGGGCCTCAGGACGCCGCTGCACCTGTGCTTCTCCTATGACGAGGAGGTGACCTGCTACGGCAGCCTCGACGCGATCCGGCGGTTCGGCCGCGACCTGCCGATGCCGATCGCCTGCATCGTCGGCGAGCCGACGCAGATGCGGGTGGTCGATGCCCAGAAGTCGCTGGCGAGCTATGTCACGTCGATCGTCGGCCGGCCGGCCCATTCCTCGATGCCGGCGCTGGGCGCCAACGCCCTGCATGCCGCCGCCCTGATCATCGCCGAGATCGACCGCATCGCCGACGAGCTGCGCGAGCGTGGCGACCCCTCCGGCCGCTTCGACCCGCCCTATTCCACCACCCAGGCCGGCCTGATCAAGAGCGGCGAGGCGGTCAATATCGTGCCCGAGCGGGCCAGCATCGTCTGGGAGGTCCGCGGCGTGCCGGCTCTGCCGCTCGACGAGGTGCCCGAGCGCATCCGCCGCTACGGCCGCGAGGTGGTCGAGCCGCGGCTGCGCCGCACGGCGCCGGAAGCCTCGGTCGTCACCGAGCTCGGCGTCGTCGTGCCCGATCTTGCGCCCGATCCCGGCTCGGCGGCGCAGACCCTGGCGCTGAGGCTCGTCGGCCAGAACCGGACCTTCGCGGTCGCCTACGGCACCGAGGCCGGCCATTTCCAGAAGGGCGGCGTGCCCACCGTGATCTGCGGCCCCGGCTCGATCGAGCAGGCGCACCGCGCCGACGAGTGGATCGCCCTGTCCGAGATCGAGGCCTGCGCCGGCTTCCTCCGGCGCCTCGCCGACACGCTGAGATAG
PROTEIN sequence
Length: 377
MTAKLVSFDTVSARSNLPLIDFVADYLAAHGVESIRLPNAEGDKAALYATIGPKDRGGVCLSGHVDVVPVEGQDWTSPPFAATARDGRLYGRGTCDMKGFVATALALVPEFLAAGLRTPLHLCFSYDEEVTCYGSLDAIRRFGRDLPMPIACIVGEPTQMRVVDAQKSLASYVTSIVGRPAHSSMPALGANALHAAALIIAEIDRIADELRERGDPSGRFDPPYSTTQAGLIKSGEAVNIVPERASIVWEVRGVPALPLDEVPERIRRYGREVVEPRLRRTAPEASVVTELGVVVPDLAPDPGSAAQTLALRLVGQNRTFAVAYGTEAGHFQKGGVPTVICGPGSIEQAHRADEWIALSEIEACAGFLRRLADTLR*