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berkeley_reactor_200306_biofilm_scaffold_11784_14

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(11524..12600)

Top 3 Functional Annotations

Value Algorithm Source
Putative 2-ketoarginine decarboxylase AruI {ECO:0000313|EMBL:EYR81937.1}; EC=4.1.1.75 {ECO:0000313|EMBL:EYR81937.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.5
  • Coverage: 366.0
  • Bit_score: 355
  • Evalue 7.80e-95
Putative 2-ketoarginine decarboxylase AruI n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C836_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 356.0
  • Bit_score: 501
  • Evalue 6.30e-139
decarboxylase similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 347.0
  • Bit_score: 312
  • Evalue 1.50e-82

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1077
GTGCGGCGGCGGACGGCGCACCGGCGCGCCGCGCCCGACCCTGAGGCCGTGGAGGCCGCCGCGGCCCTCCTCGCCGGCGCGGCGCGCCCGGTCATCATCGCCGGCGGCGGCAGCCTCGGGGCCTCGGCCGCGCTGGTCGCGCTCGCCGAGCGGACCGGCGCCGCCGTGGTGCCGACCATCGCCGGCAAGGGCGTCATTCCCGACAGCCATCCGCTGGCGCTCGAGGCGACGCTGGACCGCGCCGCGACCCAGGCGCTGATCGCCGCCGCCGACGTCGTCCTGTGCGTCGGCACGGAACTGGCCGAGCCGGACATCTGGCTCGACGGGCCGCTGCCGCTCGGCGGGCCGCTGATCCGCATCGACATCGATCCCGCCGTGCTCGCCCGCGACTATGACGCGGCCGTCGCCCTGGAGGCCGATGCCGGGCTGGCTCTCGCCGCCCTGGTCGAGGCCCTGCCCGAGCGGCCGCGCCCGGGCCCCGACCGGGCAGCCGCGGTCGCCGGCGTGCGCGCGGCGGAGCGGGCGGCGCTGACGCCGCTGGAGCGCAAGCACATCCGCGTGCTCGAGGCGCTGCGGCGGGCGGTGCCGCCGGAGGGCGTGGTCTATTCCGACATGACCCAGCTCGCCTATACCGGCTATGCCTTCTACCCCTGCGAGACGCCGCGCCGCTGGTTCTTCCCCGCCGGCTACGGCACGCTCGGCTATGCCCTCCCCGCGGCGATCGGCGGCCAGATCGCCGCGCCCGGCCGGCCGGTGATGGTGGTCGTCGGCGACGGCGGCTTCCAGTTCACGCTGCAGGAGCTCGGCCCCGCGGTCGAGCAGAAGCTGCCGATCCCGATCATCCTGTGGAACAATGACAGCCTCGCCCAGATCCGCGACGGCATGGTCGCCCGCAAGATCCCGACCATCGGCGTCGACCAGCACAACCCGGACTTCCTGAAGCTCGCCGAGGCCTATGGCTGCCGCACCGCCGGCCCTCGCAGCTTTGCCGAGCTCGAGGCGGCTGTGACATCGGCCTTCGCGGCCGACGGGCCGACCGTGATCGAGCTGCGGGAGGGCGCTCCGTTCCTGGGATAG
PROTEIN sequence
Length: 359
VRRRTAHRRAAPDPEAVEAAAALLAGAARPVIIAGGGSLGASAALVALAERTGAAVVPTIAGKGVIPDSHPLALEATLDRAATQALIAAADVVLCVGTELAEPDIWLDGPLPLGGPLIRIDIDPAVLARDYDAAVALEADAGLALAALVEALPERPRPGPDRAAAVAGVRAAERAALTPLERKHIRVLEALRRAVPPEGVVYSDMTQLAYTGYAFYPCETPRRWFFPAGYGTLGYALPAAIGGQIAAPGRPVMVVVGDGGFQFTLQELGPAVEQKLPIPIILWNNDSLAQIRDGMVARKIPTIGVDQHNPDFLKLAEAYGCRTAGPRSFAELEAAVTSAFAADGPTVIELREGAPFLG*