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berkeley_reactor_200306_biofilm_scaffold_4461_4

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 2883..4100

Top 3 Functional Annotations

Value Algorithm Source
sugar transporter n=1 Tax=Rhizobium loti RepID=UPI000364B1FE similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 403.0
  • Bit_score: 644
  • Evalue 6.80e-182
arabinose efflux permease family protein similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 403.0
  • Bit_score: 642
  • Evalue 7.30e-182
Sugar transporter {ECO:0000313|EMBL:ESY96344.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 403.0
  • Bit_score: 642
  • Evalue 3.60e-181

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Taxonomy

Mesorhizobium sp. LNHC229A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1218
ATGACCCTCACGCTGCAGCAGAAGAAAACGGTGCTCGCCTCCTTCCTGGGCTGGATGCTCGACGCCTTCGATTTCTTCCTGCTGACCTTCCTGCTCAAGGACATCGCCAAGGAATTCGGGACCGAGGTGCCGAGCGTTGCCTATGCGCTCTTCCTGACGCTGGCGATGCGCTTCGTCGGCGCCTTCATCTTCGGCCGGATCGGCGACCGCTGGGGCCGCAAGCCGGCGCTGATGCTCGACATCGTCTGCTATTCCGTGATCGGCGCGCTCGCGGCCTTCTCGCCGAACCTGATGGTTTTCCTCATCCTGCGCACCCTGTTCGGCATCGCCATGGGCGGCGAATGGGGGCTCGGCAGCTCGCTCGCCATGGAATCGATCCCGCCCCAGGCGCGCGGCCTGGTCTCCGGCATCCTGCAATGCGGCTATCCCGCCGGCTTCCTGCTCGCCTCCATCGCCTATGGCCTGCTCTACGGCCGCACCATCGGCGACTACACCATCGGCTGGCGGGCGATGTTCCTGCTCAGCATCCTGCCGGCCTTCATCGTGCTGTTCATCCGCTCGCACGTGCCGGAGTCCCCGGCCTTCCTCGAGGCGCAGAAAGGCCCGAAACCAGGCCTCTGGGACACTTTGAACGCCAATTGGAATCTGGTGATCTATTCCGTCGTGCTGATGATGTGCTTCAACTTCTTCAGCCACGGCACGCAGGACCTCTATCCCACCTTCCTCATCAAGCAGCACGGCTTCGATCCCGGCACGGTGAGCTGGATCAGTATTGTCGGCAATCTCGGCGCCATCGTAGGCGGCCTCACCTTCGGCGCCCTCTCCGAAAGGATCGGCCGGGTGAACGCCATCACCATCGCCAGCCTGATCGCCCTGCCGGCCATCCCGCTCTGGGCCTATTCCGTGACGCCCGTGATGCTCGCCGTCGGCGCCTTCGTCATGCAGATTGCCGTTCAGGGCGCCTGGGGCGTGATCCCGGCCCATCTCAATGAATTGTCGCCAGGGCCGGTCCGAGCCACCCTGCCCGCCTTCATCTACCAAGCCGGCAACCTGCTAGCCGCCATCAACGGCCCATTGCAGGCCAAGGTTGCCGAGGCACCAGGCAACAGCTACGGCTTTGCCCTGGCGCTGGTGGCGGGCATCGTCGCCGTGGCGATCATCGTCGTCATCCGCTTCAGCCCGGAGCGCCGTGGCGAGGTGCTGTCGGCCGCGCATTGA
PROTEIN sequence
Length: 406
MTLTLQQKKTVLASFLGWMLDAFDFFLLTFLLKDIAKEFGTEVPSVAYALFLTLAMRFVGAFIFGRIGDRWGRKPALMLDIVCYSVIGALAAFSPNLMVFLILRTLFGIAMGGEWGLGSSLAMESIPPQARGLVSGILQCGYPAGFLLASIAYGLLYGRTIGDYTIGWRAMFLLSILPAFIVLFIRSHVPESPAFLEAQKGPKPGLWDTLNANWNLVIYSVVLMMCFNFFSHGTQDLYPTFLIKQHGFDPGTVSWISIVGNLGAIVGGLTFGALSERIGRVNAITIASLIALPAIPLWAYSVTPVMLAVGAFVMQIAVQGAWGVIPAHLNELSPGPVRATLPAFIYQAGNLLAAINGPLQAKVAEAPGNSYGFALALVAGIVAVAIIVVIRFSPERRGEVLSAAH*