ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_4461_9

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 8978..9835

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Kaistia granuli RepID=UPI000370E6D2 similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 282.0
  • Bit_score: 453
  • Evalue 9.10e-125
ABC transporter permease {ECO:0000313|EMBL:ESW92517.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 285.0
  • Bit_score: 451
  • Evalue 6.40e-124
binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 285.0
  • Bit_score: 443
  • Evalue 3.50e-122

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LSJC280B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGACCACCGCCGCCAACGCCCGGCGCCGAGCAGGACTCGCCGGGCTCGGGCACGGCTTCGGCCTTCTCGTCGCCGCGATCTTCGTCGCCCCGATCGCCTGGACGGTGCTCTCCAGCTTCAAGCCGCCGCTCGAGGCGCGCCAGCCCCCGCTGCCGCCCTGGCCGACATCGGGCGCCTCGCTGCAGAACTACGTGACGCTCGACAGCTTCGGCGACGGCCTCTGGCATGCCGCGCAGAACAGCCTCTACGTCGCCGGCCTCACCGTCGCGCTCACGGTCGTGGTCAGCCTGCTCGCCGGCTACGGCTTCTCGCGCTTCCACTTCCCCGGCAAGGGCCTCCTCTTCGTCCTGATCCTGTCGACGATCATGATCCCGTTCCAGTCGATCCTGACGCCGATCTTCCTGATCCTGACCCGGCTCGGCCTGCAGAACACCCTCACCGGGCTGGTGCTGGTCTATGTGACGCTGCAGCTGCCCTTCTCGATCTTCATGATGCGCAACGCCTTCGACGCCGTGCCGCGCGAGATCGAGGAGGCCGCCCGCATCGACGGGGCGGCCAGCCTGGCGCTGCTCGTCAAGGTGATGCTGCCGCTGGTCTGGCCGGGCCTCGTCACCGTGGCGCTCTTCGCCTTCCTCAACGCCTGGAACGAGTTCCTGGCCGCGCTGGTGCTGATGACCGACCAGTCGCAGTTCACCCTGCCGATCATGATGACCGCGGTGCAGTCCGGCCGCTTCGGCGCCATCGACTGGGGCGCCGTCCAGGCCGGGGTCACCGTGATGATGATCCCCTGCCTGATCCTCTTCCTCCTGCTGCAGCGCTACTACATCCGCGGCCTGACCGCCGGCGCGGTGAAATAG
PROTEIN sequence
Length: 286
MTTAANARRRAGLAGLGHGFGLLVAAIFVAPIAWTVLSSFKPPLEARQPPLPPWPTSGASLQNYVTLDSFGDGLWHAAQNSLYVAGLTVALTVVVSLLAGYGFSRFHFPGKGLLFVLILSTIMIPFQSILTPIFLILTRLGLQNTLTGLVLVYVTLQLPFSIFMMRNAFDAVPREIEEAARIDGAASLALLVKVMLPLVWPGLVTVALFAFLNAWNEFLAALVLMTDQSQFTLPIMMTAVQSGRFGAIDWGAVQAGVTVMMIPCLILFLLLQRYYIRGLTAGAVK*