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berkeley_reactor_200306_biofilm_scaffold_4461_12

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 12865..14175

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YL05_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 430.0
  • Bit_score: 665
  • Evalue 3.10e-188
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC50554.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 428.0
  • Bit_score: 683
  • Evalue 1.50e-193
extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 435.0
  • Bit_score: 652
  • Evalue 7.60e-185

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Taxonomy

Bradyrhizobium sp. LTSP885 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1311
ATGAAATTCCTGGCCAAGATCGGCCTGTCGCTGACGGCGCTGCTGCTTGCGGGTGCCGCGGCGCGGGCCGAGACCATCACCGTCGCCACCGTCAACAACGACGACATGATCATCATGCAGAAGCTCTCCTCGGAGTGGGAGAAGGCGACCGGCAACAAGGTCAACTGGGTGGTGCTCGAAGAGAACGTGCTGCGTCAGCGCGTGACCACCGATATCGCGACCAAGGCAGGTCAGTTCGACATCGTCACCATCGGCGCCTATGAAACGCCGATCTGGGGCAAGGCCGGCTGGCTCGCCTCGCTCAGCGATCTCGGCGACGACTACGACTACAAGGATGTGTTCGAACCGCTGCGCAACGGCCTCTCGGTCGACGGCAAGCTTTATGCGGTGCCCTTCTACGCCGAGAGCTCCTTCACGCTCTATCGCAAGGACCTGTTCGAGAAGGCCGGGCTGACCATGCCCGAGCAGCCGACCTGGGACCAGATCGCCGAGTTCGCCGACAAGCTCACCGACAAGTCGAAGGAGCAATACGGCATCTGCCTGCGCGGCAAGCCGGGCTGGGGCGAGAACATGGGGCTGATCACCACGATCGTGAACACGTTCGGCGGGCGCTGGTTCGACATGGACTGGAAGCCGCAGCTGACCTCCGATCCCTGGAAGGAGGCCGTCAAGTTCTATGTCGACCTGCTGAAGCGCGACGGGCCGCCGGGCGCCACCTCCAACGGCTTCAACGAGAACCAGGCTCTGTTCGCCAGCGGCAAATGCGCCATCTGGGTGGACGCGACCTCGGCTGCCGGCCGCCTCTACAACAAGGCGACGTCGAAGGTCGGCGATGTGCTGGCCTTTGCCCAGCCGCCCATCAAGGTGACGCCGAAGGGCGCGGGCTGGTTCTGGGCCTGGTCGCTGGCCGTGCCGTCCTCCACCAAGAAGCTCGATGTGGCCAAGTCCTTCGTCAAGTGGGCCACCTCCAAGGACTATGTCACCCGCGTCGGCGAGACGCAGGGCTGGGTTGCCGCTCCGCCCGGCACGCGCCAGTCGACCTATGACAATCCGGAGTACAAGAAGGCTGCTCCCTTCGCCGACATGGTGCTGAAGTCGATCCTGACCGCCGATCCCACCAACGCCACGAAGGACCCGGTGCCGTACAAGGGCATCCAGTTCGTGGCGATCCCGGAATTCCAGGGCATCGGCACGTCAGTCGGACAGGCCATCGCCTCGATCCTCGCCGGCCAGCAGCCCGAGGACGCAGCCCTCGGTGCCGCGCAGGATGACGTAACCCAGACGATGCAGCAGGCCGGCTACATCAAGTAG
PROTEIN sequence
Length: 437
MKFLAKIGLSLTALLLAGAAARAETITVATVNNDDMIIMQKLSSEWEKATGNKVNWVVLEENVLRQRVTTDIATKAGQFDIVTIGAYETPIWGKAGWLASLSDLGDDYDYKDVFEPLRNGLSVDGKLYAVPFYAESSFTLYRKDLFEKAGLTMPEQPTWDQIAEFADKLTDKSKEQYGICLRGKPGWGENMGLITTIVNTFGGRWFDMDWKPQLTSDPWKEAVKFYVDLLKRDGPPGATSNGFNENQALFASGKCAIWVDATSAAGRLYNKATSKVGDVLAFAQPPIKVTPKGAGWFWAWSLAVPSSTKKLDVAKSFVKWATSKDYVTRVGETQGWVAAPPGTRQSTYDNPEYKKAAPFADMVLKSILTADPTNATKDPVPYKGIQFVAIPEFQGIGTSVGQAIASILAGQQPEDAALGAAQDDVTQTMQQAGYIK*