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berkeley_reactor_200306_biofilm_scaffold_4471_1

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 3..710

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X5Q2_OCHA4 similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 236.0
  • Bit_score: 295
  • Evalue 4.50e-77
ABC transporter {ECO:0000313|EMBL:KJC50500.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 239.0
  • Bit_score: 306
  • Evalue 2.70e-80
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 236.0
  • Bit_score: 295
  • Evalue 1.30e-77

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Taxonomy

Bradyrhizobium sp. LTSP885 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
CAGCTCTCCGGCGGCCAGCGCCAGCGCGTCGCCATCGGCCGCGCCATGGTGCGCCAGCCCCGCGTCTTCCTGTTCGACGAGCCGCTCTCCAACCTCGACGCCGCGCTGCGCGTGCAGATGCGCATCGAGCTCGCCCGCCGGCTCGAGGACCGCGGCGTCACCATGATCTACGTCACCCACGACCAGGTCGAGGCGATGACGCTCGCCGACAAGATCGTCGTGCTGCGCGACGGCCGCGTCGAGCAGGTCGGCTCCCCCCTCCAGCTCTACCACCATCCCCGCAACCGCTTCGTCGCCGGCTTCATCGGCTCGCCCACCATGAACTTCATCGCGGTGACCGCCCGGGCCGCCGGCGCGGCCGGCCTCACCGTCGACCTGCCCGGCGGGGCCGCCCTCACCGTGCCGGTCTGCGCCGACGGCATCGCCCCCGGCGACACCCTGACGCTCGGCATCCGCCCCGAGCATCTCAGGCGCTCGGACACCGGCGAGCTCGCCGGCGAGGTCATGGTGGTCGAACGCCTCGGCGGCCAGACCTTCCTCTATGTCCAGATCACCGCCTCCAGCCTCTTCATCGTCCAGGCCGACGGCGACGACCGCTCCAGGGTCCATGACCGCGTCGGCGTCGGCGTCACCGCTTCAGCCGCGCATCTGTTCGGACAGGACGGCACCGCGCTGCCTGCCCTGCAAAGAAATCCCCTCGCGGTATGA
PROTEIN sequence
Length: 236
QLSGGQRQRVAIGRAMVRQPRVFLFDEPLSNLDAALRVQMRIELARRLEDRGVTMIYVTHDQVEAMTLADKIVVLRDGRVEQVGSPLQLYHHPRNRFVAGFIGSPTMNFIAVTARAAGAAGLTVDLPGGAALTVPVCADGIAPGDTLTLGIRPEHLRRSDTGELAGEVMVVERLGGQTFLYVQITASSLFIVQADGDDRSRVHDRVGVGVTASAAHLFGQDGTALPALQRNPLAV*