ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_4471_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(1733..2899)

Top 3 Functional Annotations

Value Algorithm Source
PrpF family protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IXZ3_ACIMA similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 379.0
  • Bit_score: 431
  • Evalue 8.60e-118
PrpF family protein similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 379.0
  • Bit_score: 431
  • Evalue 2.40e-118
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 385.0
  • Bit_score: 434
  • Evalue 1.10e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1167
ATGCCGCAGCTTTCGGTCCCGGCAGTCTACGTGCGCGGCGGAACCAGCCGCGCGCTGGTGTTCCGGGCGCAGGACCTTCCGGAGGACGCGCGGCTGCGCGACGCGATCATTCTCGCCGCGCTGGGCAGCCCCGATCCGAACAAGCGTCAGCTCGACGGGCTCGGAGGCGCGATATCGTCCTTGTCGAAGGTCGCGATCGTCGCGCCCGCATCACGCCCCGACGCCGATGTCGACTACACCTTCGGTCAGGTCGCCATCGACGCCCCCATCGTCGGCTATCGCGGCAATTGCGGCAACATCTCCGCGGCGATCGGCCCCTTCGCGGTCGACGAAGGCATGGTCGCGACGACGGGCGATACGGCGCGCGTGCGCATTCACAACACCAATACCGGCAAGATCATCGTGTCGGACTTCCCGCTGCAGGACGGGCGCGCCGCCGTGGACGGCGACTTCGAGCTGCCGGGCGTGGCCGGAACCGGCGCACCGGTGCGCCTGTCCTTCCTCGACCCCGGCGGCGCGGTCACCGGCCGCCTCCTGCCGACCGGCGCTCCGGTCGAGCGGCTCGATCTGCCGGGATTCGGCGCTATTGCGGTGTCGCTGGTGGACGCCGCCAATCCCGTCGTGTTCGTGGCCGCCGACACGCTGGGGCTCGACGGCACCGAGAGGCCGTCGGATCTCGAGCAGGACGCGGGCTTGATGAAGGCGTTCGAGGACCTGCGGGTTGCGGCCGCGCTGCGCATGGGCATCGCGGCTGACGAGGACGAGGCCCGTCGACGGGTCCGCAACCTGCCCCAGGTCGGCATCGTTTCGCGCCCTGCCACGGCGCGGACGGCGAGCGGCGGGACGATATGCGCCGACGACGTTCACATCACGACGCGGATGATCTCGGCCGGACAGCCCCACCGAGCCTCGCCGCTGACGGGGGCGATGTGCCTTGCGGTTGCGATGCGCATCGCAGGAACGCTGCCGCACGGGCTCGCGCGCCCGTCCGACGAGGGCCGGGACATGATCATCGGCCATCCCTCCGGCACGCTGCCGGTCGCGGCCCGCGTCACGAACGGGCCGGAGCCGCACGCCCGCGAAGCGGTGGTATACCGAACGTCGCGGCGGTTGATGGAGGGGCGCGTGCTGGTGCCGCGCAGCGCGCTCGGACGAGCGGATACATGA
PROTEIN sequence
Length: 389
MPQLSVPAVYVRGGTSRALVFRAQDLPEDARLRDAIILAALGSPDPNKRQLDGLGGAISSLSKVAIVAPASRPDADVDYTFGQVAIDAPIVGYRGNCGNISAAIGPFAVDEGMVATTGDTARVRIHNTNTGKIIVSDFPLQDGRAAVDGDFELPGVAGTGAPVRLSFLDPGGAVTGRLLPTGAPVERLDLPGFGAIAVSLVDAANPVVFVAADTLGLDGTERPSDLEQDAGLMKAFEDLRVAAALRMGIAADEDEARRRVRNLPQVGIVSRPATARTASGGTICADDVHITTRMISAGQPHRASPLTGAMCLAVAMRIAGTLPHGLARPSDEGRDMIIGHPSGTLPVAARVTNGPEPHAREAVVYRTSRRLMEGRVLVPRSALGRADT*