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berkeley_reactor_200306_biofilm_scaffold_4471_6

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 6714..7709

Top 3 Functional Annotations

Value Algorithm Source
Putative substrate-binding component of ABC transporter n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QF75_RHOPT similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 331.0
  • Bit_score: 453
  • Evalue 1.40e-124
Nitrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIZ48209.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 331.0
  • Bit_score: 465
  • Evalue 5.00e-128
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 331.0
  • Bit_score: 453
  • Evalue 3.90e-125

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 996
ATGAGAAGAATTCTGATAGCCGCAATGCTGTTGGCGGCCGCGATGGCGCCGGCTGCCGCTCAGACCAAGATCAAGCTGATGGTCGGCGGAATCGACAAGCAGGCCTACCTGCCCGTCAAGCTCACCGATCAGCTCGGCCACTTCAAGGAGCAGGGCCTCGACGTCGAGCTCTACAACTCGAATTCCGGGTCCCAGGCGGCGACCGCGCTTCTTGCCGGGGAAGTGCAGGTGGTCGTCGGCTTCTATGATCACACCATCGATCTGCAAGCCAAGGGCAAGCATATCGTCAATGTCGCCCAGCTCTCCATCTCGCCCGGCGAAGTCGAGCTGGTGGTCGCCAAGGACGCCGACACCTTTTCGAATCCGGCGAACTGGAAGGGCCACGCGCTCGGCGTGACCGGGCTCGGCTCGGCGACGGATTTCCTCACCCGCTATCTCGCGACCAAGGCAGGCCTGAAGCCGAGTGAAATTTCGACGATCCCCGTCGGCGCCGGCGACACCATGATCGCCGCCCTCCAGCAGAACCGCATCGTGGCCGGAATGACGACGGAACCGACCGTTTCGCGGGCCCTCAAGATGGGGATCGCGAAGGTCGGGATCGACCTGCGCAATCCGGACACCACGCGGGCGGCCCTCGGCGGCGACTATCCCAGCGCTTGCGTCTATGTCGATGCAGGCTGGTTGGACGGGAACCGCGAGACGGTCCAGAAGGTCGTCAATGCCTTCATCGGGACGCTGAAGTGGATCGACGCCCATTCGCCGGAAGACATCGCCGACAAGATGCCGAAGGATTACTACGCCGGTGACCGTGACCTCTATGTGCAAGGTCTTCGGGACGGCAAGTCGCAATACTCCAAGGACGGCGTGCTGAGCGCGAGCGCCGCCGAGAACGTGCTGCGCGTGCTCAAGGCGGTGAATCCGGCTGTCCAAGGCAAGGAGATCGACCTCTCCAGGACCTACACGGCCGAGTTCGTGTCGCGCGCCAACGGGTCTTGA
PROTEIN sequence
Length: 332
MRRILIAAMLLAAAMAPAAAQTKIKLMVGGIDKQAYLPVKLTDQLGHFKEQGLDVELYNSNSGSQAATALLAGEVQVVVGFYDHTIDLQAKGKHIVNVAQLSISPGEVELVVAKDADTFSNPANWKGHALGVTGLGSATDFLTRYLATKAGLKPSEISTIPVGAGDTMIAALQQNRIVAGMTTEPTVSRALKMGIAKVGIDLRNPDTTRAALGGDYPSACVYVDAGWLDGNRETVQKVVNAFIGTLKWIDAHSPEDIADKMPKDYYAGDRDLYVQGLRDGKSQYSKDGVLSASAAENVLRVLKAVNPAVQGKEIDLSRTYTAEFVSRANGS*