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berkeley_reactor_200306_biofilm_scaffold_4471_10

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 10730..11776

Top 3 Functional Annotations

Value Algorithm Source
Ribose ABC transporter ribose-binding protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XLD7_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 322.0
  • Bit_score: 355
  • Evalue 3.20e-95
periplasmic binding domain protein similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 347.0
  • Bit_score: 496
  • Evalue 3.30e-138
Ribose ABC transporter ribose-binding protein {ECO:0000313|EMBL:CDD07137.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 322.0
  • Bit_score: 355
  • Evalue 4.40e-95

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Taxonomy

Dorea sp. CAG:317 → Dorea → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1047
ATGAACATGCTGAGGGGGCTGGCAGCGGCGGCGCTGCTGGCGACGGTGGCGCTTGCGGCCGGATCGGCCCATGCCCAGGCGCTGGCCGGCAAGAAGATCGGTCTTGCCTCCCGCGAGATCACCAACGACTACAACAGGGACATCATCTCCGGCGCCACCGCCGTGCTGAAGGCCGCGGGCGCCGAGGTCGTGGTCACCGACGGCGGCACCGACCCGCGCAAGCACAACGAGAACATCGAGAGCCTGATCAATTCCGGCGTCGCCGGCATCATCGTCCAGCTCGGCGATCCCCAGCAGCTCGCGCCGGTCGTGGCCAAGGCCAATGCCGCAGGCATCCCGGTGATCACCACCTCGATCGGCTCCAAGACGGCCGGCGCCATCGCCGATGTCGGCGGCGACGAGGCCCTGATGGCCGCCATGCTGGCGCGCTCGCTGCTCTCCAGCATCGACTACAAGGGCAATGTCGTCGCCTTCTGGGTGCCGGGTGCGCCGCTGCTCGAGACGCGCAAGCGCGTGTTCGAGGCGGTCGTCGCCGACTATCCCAACGTCAAGGTGCAGTGGGTGCCCACCGAGCACAGCGCCGCCAAGGTGCAGACCCAGATGGAGGACCTGCTGACCGCCAATCCCGAGAAGGGCAGCATCGCCGGCGTCTGGGGCGCCTACGACCTCCTGGTCTCCGGCGCGGTCGAGGCGGTGCGGCGCGCCGGGCGTGACGAGATCAAGATCGCCTCGATCGACGGCGACCGCATCGGCTTCCAGATGCTGCTCGACGAGAAGAGCCCGTTCGTGGCGACCGTGGTGCAGGACGTGCCGGCGATCGGCCGGCTGGCGGCGGACGCCCTGGTCTCCGCCATCGGCGGCAAGAAGGAGTTCCCGAGCGCCATCTTCACCGAGGTCTATGTCGCCACCCATGCCAACGGCGCCGCCGCGGCGGAGAAGCGCTGGGGCCCCGGCGTGTGGGACGCGCTCGGCATCGCCAAGGCCGACGTGGAGGGCCGCTGGCCCCAGGACGGCCAGCTCGTGGTCGTGCGGCCCGTCCTGCCCTGA
PROTEIN sequence
Length: 349
MNMLRGLAAAALLATVALAAGSAHAQALAGKKIGLASREITNDYNRDIISGATAVLKAAGAEVVVTDGGTDPRKHNENIESLINSGVAGIIVQLGDPQQLAPVVAKANAAGIPVITTSIGSKTAGAIADVGGDEALMAAMLARSLLSSIDYKGNVVAFWVPGAPLLETRKRVFEAVVADYPNVKVQWVPTEHSAAKVQTQMEDLLTANPEKGSIAGVWGAYDLLVSGAVEAVRRAGRDEIKIASIDGDRIGFQMLLDEKSPFVATVVQDVPAIGRLAADALVSAIGGKKEFPSAIFTEVYVATHANGAAAAEKRWGPGVWDALGIAKADVEGRWPQDGQLVVVRPVLP*