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berkeley_reactor_200306_biofilm_scaffold_4471_12

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 14374..15357

Top 3 Functional Annotations

Value Algorithm Source
Sugar ABC transporter permease protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WCM5_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 241.0
  • Bit_score: 245
  • Evalue 4.30e-62
branched-chain amino acid transport system / permease component family protein similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 312.0
  • Bit_score: 418
  • Evalue 1.10e-114
Sugar ABC transporter permease protein {ECO:0000313|EMBL:CDD07140.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 241.0
  • Bit_score: 245
  • Evalue 6.10e-62

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Taxonomy

Dorea sp. CAG:317 → Dorea → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 984
ATGTCATCCGCTGCCGCCCGGCCCACCCGCGCCCCCGTCCTCGTCGAGCAGCTGCGCGCCTATGGCCCGGCGGTCGGCATGCTGGCGGTCTTGATGATCTTCGCGGTGCTGAAGCCGGCGTTCTTCAGCCTCGCCAATATCGGCAACGTGCTGCACCAGAGCGTCATCCTGGTGGTGATGTCGTTCGGGCTCGGCGTGGTGATGGCGATGCGCGGGGTCGACCTCTCCGTCGCCCAGATCGCCGATGCCGCCGGCCTGCTCGCCGCGGTGCTGGTGCTGCACGGCCAGCCGCTCTGGCTGGTCCTGGCCGCGCCGCTCGCCTTCGGCCTGCTGGCCGGCCTCGTCAACGGCGTGCTCGCCGCCTATGCCGGCATCCCCGCCATCATCGGCACGCTGGGCATGATGTTCGTCATCCGCTCGGGCGAGCTGCTGATGACCAACGGCGCCGAGCCGCAGATCCTGTTCACGCTGCCCCGCGGCCTCACGCGCGCCTTCTTCTTCATCGGCCAGGGCTCGATCGGCCCGGTCTCGGCGCTGGTCGTGCTCGGCCTCGTCGTGTTCGCCGCGATGATGCTGGTCACCACCATGACCAGCTTCGCGCGGCGGGCGCGGGCGATCGGCGGCAATGCGCGCGCGGCCTATCTCGCCGGCATCGACGTGCGCGCCGTGTTCGCCGGCGGCTTCGTCCTCGCCGGCCTGCTGTCGAGCATCTCCGGGGTGGCGCTGGTCTCGCGCACCTCGATCGCGGTGCCGCGCGGCGCCGAGGCCTATCTGCTCGACGCCTTCGCCGCCGTCTATCTCGGGACGCTGCTGTCGCGGCGGGCGGAGATCACCATCTGGGGCACGCTGATCGGCGCCCTGTTCATCACCTTTCTCGGCAATGGCCTGACCCTGCTCGGCCTGGGCGCGCCCTACCGCTTCGCCCTGAACGGCGGCTTCATCCTCATGGCCATGGCGATCGGCGCGCTGAAGCGCAACACCTGA
PROTEIN sequence
Length: 328
MSSAAARPTRAPVLVEQLRAYGPAVGMLAVLMIFAVLKPAFFSLANIGNVLHQSVILVVMSFGLGVVMAMRGVDLSVAQIADAAGLLAAVLVLHGQPLWLVLAAPLAFGLLAGLVNGVLAAYAGIPAIIGTLGMMFVIRSGELLMTNGAEPQILFTLPRGLTRAFFFIGQGSIGPVSALVVLGLVVFAAMMLVTTMTSFARRARAIGGNARAAYLAGIDVRAVFAGGFVLAGLLSSISGVALVSRTSIAVPRGAEAYLLDAFAAVYLGTLLSRRAEITIWGTLIGALFITFLGNGLTLLGLGAPYRFALNGGFILMAMAIGALKRNT*