ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_4471_32

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(37487..38227)

Top 3 Functional Annotations

Value Algorithm Source
LamB/YcsF family protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IVP4_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 234.0
  • Bit_score: 366
  • Evalue 1.30e-98
Methylobacterium aquaticum plasmid pMaq22A_2p DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ50018.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 240.0
  • Bit_score: 411
  • Evalue 6.30e-112
LamB/YcsF family protein similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 234.0
  • Bit_score: 366
  • Evalue 3.60e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylobacterium aquaticum → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
GTGGTCCTGATCAACTGCGACATGGGCGAAGGCTTCGGCATCTGGAAGCTCGGGGACGACCCGGGCATCATGCCCTCCATCCACATCGCCAATGTCGCCTGCGGCTTCCACGGCTCGGACTTCAACCACATGCGCGCCACGGTGCGCCTCGCCAAGGCGCACGGCGTCAAGGTCGGCGCCCATCCCTCCCTGCCCGACCTGCAGGGCTTCGGCCGGCGCGAGATGAAGATCGGCCGCGAGGAGCTGGCCAACTGCCTGATCTACCAGATCGGTGCCCTGAAAGGCTTCCTCGACGCCGAGGGCATGAGCCTCAACCATATCAAGCCGCACGGCTCGCTCTACGGCATGGCGGCGCGCCAGCCCGAGATCGCCGAGGCGATCTGCGACGCTGCCGACGTGTTCAGGGTGCCGATCCTCGGCATGGTCGGCACGCTGCACGCCAGCATCTATCCCGCCCGCGGCCACGGCTTCATCGCCGAGTTCTATGCCGACCTCGACTATTCCGACGAGGGCACGGTGATCATCACCCGCGAGCATCCGCCGCTCGACCCGCACGCGGCGGCCCGGCGCTGCGTCAGGGCCGTGCGCGAGGGGCTGGTCACCTCCGTCGGCGGCCACGAGATCGAGGTCGGCACCGACACGATCTGCGTCCATTCCGACACGCCGGGCGCCGAGGTCCTGGCACGCGTGCTCAGCGAGACCCTGCGCGCCGAGGGCATCGTGCCCCCTGCGTCCCATTGA
PROTEIN sequence
Length: 247
VVLINCDMGEGFGIWKLGDDPGIMPSIHIANVACGFHGSDFNHMRATVRLAKAHGVKVGAHPSLPDLQGFGRREMKIGREELANCLIYQIGALKGFLDAEGMSLNHIKPHGSLYGMAARQPEIAEAICDAADVFRVPILGMVGTLHASIYPARGHGFIAEFYADLDYSDEGTVIITREHPPLDPHAAARRCVRAVREGLVTSVGGHEIEVGTDTICVHSDTPGAEVLARVLSETLRAEGIVPPASH*