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berkeley_reactor_200306_biofilm_scaffold_5879_8

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 8973..9686

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium sp. AP16 RepID=J2CS40_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 237.0
  • Bit_score: 394
  • Evalue 5.50e-107
GntR family transcriptional regulator protein similarity KEGG
DB: KEGG
  • Identity: 83.1
  • Coverage: 236.0
  • Bit_score: 394
  • Evalue 1.60e-107
Transcriptional regulator {ECO:0000313|EMBL:EJK79864.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 237.0
  • Bit_score: 394
  • Evalue 7.70e-107

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Taxonomy

Rhizobium sp. AP16 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
GTGAAAAGCAGCAAAAGCAGCCTCTACGACGATCTGAAGCAGCAGATCCTGACGATGGAGCTCGAGCCGGACGCGGATCTCGACGAGATGGTCCTGTGCGAGCGTTACGGGCTCTCCCGCACGCCCGTGCGCGAGGTTTTCCGGCGCCTCGCCGGCGAGGGCTACATCGACATCCGCGAGAACAAGGGCGCTCGCGTCATCCCGATGAACCATTCGACGCTGCGGCATTTCTTTCTGGTCGCGCCGATGGTCTATGCGGCGATCGGGCGGCTGGCGGTCCAGAACTTTACCAGGCCGCAGCTCTCGGACCTCAGCACCACGCAGGAGCGTTTCCGCGCCGCCAGCAACGCGGGCGACGCGTCCGCGATGGTCCTCGAGAACAACCGGTTCCACGAGATCATGGGTGAGATGTCGCGGAACGTCTATCTGCAGCCGAGCCTCGGCCGGCTGCTGATCGACCATGCCCGCATTGGCCACACCTTCTTCCGGCCGCGCAACGACGACATGCGCCAACGGCTGACGCTGGCCGTCCAGCATCATGACGGCTTCATCGCGGCCATCGAACGGCACGACGAGGACGCCGTCGTCGACCTCGTCTTCGAGCATTGGGAACTGTCGCGGGAGAACATGGAGATGTTCATCGCGCCGCAAGGGCTGAAGGCGGACGCGCTCGTCGATGGACCCACCACCTCATCGATGGAGAAGACGTCTTGA
PROTEIN sequence
Length: 238
VKSSKSSLYDDLKQQILTMELEPDADLDEMVLCERYGLSRTPVREVFRRLAGEGYIDIRENKGARVIPMNHSTLRHFFLVAPMVYAAIGRLAVQNFTRPQLSDLSTTQERFRAASNAGDASAMVLENNRFHEIMGEMSRNVYLQPSLGRLLIDHARIGHTFFRPRNDDMRQRLTLAVQHHDGFIAAIERHDEDAVVDLVFEHWELSRENMEMFIAPQGLKADALVDGPTTSSMEKTS*