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berkeley_reactor_200306_biofilm_scaffold_5879_12

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 13528..14379

Top 3 Functional Annotations

Value Algorithm Source
ABC-type proline/glycine betaine transport system, periplasmic component n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9N5A2_RHILT similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 283.0
  • Bit_score: 530
  • Evalue 5.80e-148
ABC-type proline/glycine betaine transport system, periplasmic component {ECO:0000313|EMBL:EJB03099.1}; Flags: Precursor;; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 283.0
  • Bit_score: 530
  • Evalue 8.20e-148
prox3; Glycine betaine-binding periplasmic protein Flags: Precursor similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 283.0
  • Bit_score: 514
  • Evalue 1.60e-143

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 852
ATGAAAACGCTGTGGAAAGCAATTTGTGCTGCCGCAATGGTCGGGATGACCATGCTGTCCGCGCATGCTGAGGAGAAGACCATTTCGATGGGAACTCTCTCTTGGGAGGATCTGACCCCCATCACCGGCATCACCAAGAAGGTGCTCGAGGACGCCGGCTATACCGTGAAGGTGACCCAGTTCTCGGAATGGGGCATCGCCTACGCCGCCCTGACCAAGGGCGATATCCAGATTCTCGCATCCCAGACGGACTATGTCGCCCAGGACTACTGGGACAAGAACAAGAACAAGCTCGAAAAGCTTTCGCCCGTCTCGCATGGGCTCTATCAGGGGATCGCGGTTCCCAAATACGTCACCATCGACACGACCGACCAGCTCAACGACAACGCCGACAAGTTCGGCGGCAAGATCATCGGCATCGAGCCGGGGTCGGGCCTGATGCGCGACACGGCCAACGCGGTCAAGGACTACGGCCTCAAGCTGCAGCTTCTCGAAGGCAGCACGGCGGCGATGACGGCGGCGCTCAAGTCGGCGATCGACCGCAAGGAATGGGTTGCGGTGACCCTGTGGACGCCCTCCTGGATGGCCCAGAAATATGACGTGAAGTTCCTCAGGGATCCGAAGGGCGTCTATCCGCCGCCGCAGAGCTATTACTGGATCGGCCACAAGGGTTTCGCCGCCGACTATCCTCATGCCCGAGAGGTCATCGGCAGCGTCTATGTGCCGATTGACGACATCGCCGCCATCAACAGCGCCGTCAAGGACGGCAAATCGATGGACGACGCCGTCAAAGCCTGGATCGACGCCCACGCCGATCTCATGAAGCGGTGGGAGAACATCAAGTCCCAGTAG
PROTEIN sequence
Length: 284
MKTLWKAICAAAMVGMTMLSAHAEEKTISMGTLSWEDLTPITGITKKVLEDAGYTVKVTQFSEWGIAYAALTKGDIQILASQTDYVAQDYWDKNKNKLEKLSPVSHGLYQGIAVPKYVTIDTTDQLNDNADKFGGKIIGIEPGSGLMRDTANAVKDYGLKLQLLEGSTAAMTAALKSAIDRKEWVAVTLWTPSWMAQKYDVKFLRDPKGVYPPPQSYYWIGHKGFAADYPHAREVIGSVYVPIDDIAAINSAVKDGKSMDDAVKAWIDAHADLMKRWENIKSQ*