ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_12255_84

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(87155..88246)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DQB8_BRAJP similarity UNIREF
DB: UNIREF100
  • Identity: 39.2
  • Coverage: 362.0
  • Bit_score: 239
  • Evalue 3.50e-60
Uncharacterized protein {ECO:0000313|EMBL:KGA12363.1}; TaxID=1504318 species="Bacteria; Actinobacteria.;" source="actinobacterium acAMD-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.5
  • Coverage: 357.0
  • Bit_score: 258
  • Evalue 1.30e-65
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase similarity KEGG
DB: KEGG
  • Identity: 39.2
  • Coverage: 362.0
  • Bit_score: 239
  • Evalue 9.80e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

actinobacterium acAMD-2 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1092
ATGCCGCTCCATCCCCTGACCGTGCAGATCGTCGGCAGCTATGCCAAGCCGCACTGGCTGGCTCACCACCGCCGGATGCGGGCCGTCGACGGCAGCTGGTGGCGCCCCGACGCCGAGGTGCTGCGCGAGGCCAAGCAGGACGCGGCCCTGCTCGCCATCTACGAGCAGGAGCGGGCCGGGCTCGATCTGGTGACGGATGGCGAGGCGCAGCGGGCCGCCTATGACCGGCATTTCCTGGCCGGCCTCACGGGGATCGATACGTCAGCCATGGAGCAGGTCGCGGTCGCGAGGGCCGTCGACTGGAGCCGGCGCGACGACACCGGCTGGGAGGAATATACCCGCATCGGCGAGCTGCGGCCGCGCATCGTCGGCGCCATCGGCTGGCAAGGCCCGATGGCGCTGGCCGAGCTGGACTTCCTCAAGGCGCACGCGCGGCGGCCCTGCAAGGTGACCGTCATCGGTGCGCTGTCGCTCTATTGCCAGGTCGTCGACCGGTTCTACGGCGACGCCGAGGCTGCCATCATGGCCCTTGCCGCGGCGCTCAACCACGAGCTGCTGGCCCTCGATCAGGCGGGCGCGGACGTGCTGCAGATCGACGAGCCCGCCTGGCACAGCCAGCTGACGCTCGCCCGCAAGGTCGGCCCGGCGGCGATCGCCAGGATGGTCGAAGGGGTGCGGGCGCCCGTCATCGTCCATGTCTGCTACGGCTATGCGCTGGTCTATCGGGAGAAGCGCGCCAGCGTGGTCTATCCCGAGGTGCTGGAACTGCTGGCATCCTGCCCGATCGCCGGCATCAGCATCGAATACGAGCAGCCGCGGCACGAGCCGACCATCCTCCGGCATTGCGGGGACAAGCATGTGGTGCTCGGCCTGCTCGATCTCGGCTCGACGGAGATCGAGACGCCCGAGCACGTCGCGTCGCGCCTGCGGGCCGCCCTGCGTCACGTGCCGCCGGAGCGCCTGCACCCATCCTCCGATTGCGGCATGTGGTATCTCGCCCGTGATGTTGCGTTCGGCAAGATCAGCGCGTTGGCGGCAGGCACGGCCATCATTCGCACAGAGATCGGCAGCGCGGCCGGGCGCGTGGAATGA
PROTEIN sequence
Length: 364
MPLHPLTVQIVGSYAKPHWLAHHRRMRAVDGSWWRPDAEVLREAKQDAALLAIYEQERAGLDLVTDGEAQRAAYDRHFLAGLTGIDTSAMEQVAVARAVDWSRRDDTGWEEYTRIGELRPRIVGAIGWQGPMALAELDFLKAHARRPCKVTVIGALSLYCQVVDRFYGDAEAAIMALAAALNHELLALDQAGADVLQIDEPAWHSQLTLARKVGPAAIARMVEGVRAPVIVHVCYGYALVYREKRASVVYPEVLELLASCPIAGISIEYEQPRHEPTILRHCGDKHVVLGLLDLGSTEIETPEHVASRLRAALRHVPPERLHPSSDCGMWYLARDVAFGKISALAAGTAIIRTEIGSAAGRVE*