ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_12255_85

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 88383..89120

Top 3 Functional Annotations

Value Algorithm Source
Phosphonate C-P lyase system transcriptional regulator PhnF, GntR family n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JIK8_DESDE similarity UNIREF
DB: UNIREF100
  • Identity: 44.1
  • Coverage: 236.0
  • Bit_score: 196
  • Evalue 3.00e-47
phosphonate C-P lyase system transcriptional regulator PhnF similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 236.0
  • Bit_score: 196
  • Evalue 8.40e-48
Phosphonate C-P lyase system transcriptional regulator PhnF, GntR family {ECO:0000313|EMBL:EGB15442.1}; TaxID=641491 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio desulfuricans ND132.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.1
  • Coverage: 236.0
  • Bit_score: 196
  • Evalue 4.10e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Desulfovibrio desulfuricans → Desulfovibrio → Desulfovibrionales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGGCGCAGGAGGAACACCCCCTCGAGGTCAGGGATCATGCGGGGTCCCGCTGGGAGCAGATCGTTGCGGCGCTGCGCCGGGACATCCGGGAGGGCATCTACGCGCCCGGCATCCGGCTGCCGCGCGAGCATGATTTCTGCGACCGGTTCGGCGTCAGCCGGTTCACCGTGCGGCGGGCCCTGGAGAGCCTCGAGCGCGAAGGGCTGGTCCGCATCGAGCCCAAGCGCGGCGCCTTCGTGACCGACCAGATCCTCAGCTATCGGCTGGGCAACCGCACGCGCTACAGTGAGAACATCCGCCGCTCCGGATTCAGTCCCGGACAGATCGTTCTGGGAAGCCGAACCGACATCGCTGACCCTGTCGTCCGAGAAGCCCTCGATCTTCCGCTGGGCTCGGAAGTCCTGGTGATAGAAGGTCTCGGCGAAGCCGACGGCATTCCGATTTCCTATGGGTACAATATCTATCCCCTTCCGCGCTTCAACGGGTTCGACGAGATCGCCAGGCAAAACAAATCTTATACGCTGGCGCTCGCCCATTTCGGCATCGAGGACTACCGGCGGCTCACGACCGGCGTGATCGCACGTCCGCCGACGGTGGAGGAGACACGACGGCTGAAGATCTCGCGCTTCGTCCCCATCCTCGAGACGCAGGCCGTCGACGTGGACGCCGAGGGCAGGCCGATCAAGTTCGGCCTGAGCGCGTTTCGTTCGGACCGCATGCGTCTGGTCGTCGAGTAG
PROTEIN sequence
Length: 246
MAQEEHPLEVRDHAGSRWEQIVAALRRDIREGIYAPGIRLPREHDFCDRFGVSRFTVRRALESLEREGLVRIEPKRGAFVTDQILSYRLGNRTRYSENIRRSGFSPGQIVLGSRTDIADPVVREALDLPLGSEVLVIEGLGEADGIPISYGYNIYPLPRFNGFDEIARQNKSYTLALAHFGIEDYRRLTTGVIARPPTVEETRRLKISRFVPILETQAVDVDAEGRPIKFGLSAFRSDRMRLVVE*