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berkeley_reactor_200306_biofilm_scaffold_12255_86

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 89343..90728

Top 3 Functional Annotations

Value Algorithm Source
Carbohydrate ABC transporter substrate-binding protein, CUT1 family n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RIE5_MOOTA similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 443.0
  • Bit_score: 276
  • Evalue 4.20e-71
extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 443.0
  • Bit_score: 276
  • Evalue 1.20e-71
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:ABC19794.1}; Flags: Precursor;; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.5
  • Coverage: 443.0
  • Bit_score: 276
  • Evalue 5.90e-71

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Taxonomy

Moorella thermoacetica → Moorella → Thermoanaerobacterales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1386
ATGTGCGACACCTCCGACGCTAGCCAGAGCATGCAGGATGCCGTCGAGCGCGGCGAGGATACGCTGCCTGCGGCCGCAGGCGCTGCCCGGCCGGGCACGACACGCCGCCGGTTCATCGGCGGCTCGCTGGCCGCGCTGGCGAGCAGCGAACTCGGCCTCGGCCGGGCGCTCGCCGCGGCCACGGCGAGCGGGCCGGCCACCATCGACCTCTGGCTCGGCGTCGGCCCGGACAGCGCCAAGGTCTACCGGCAACTGCTCGACCGGTTCCACGCCGCCAATCCGGACATCACCGTCAGGGTCAACAGCTTCGGCGAATACGAGCCGCTGCAGACCGCGCTGCAGGCCGCCATCGCCGGCAAGCGGCCGCCCGCCATCGCGCAGATCGGCTTCGACGTCATCCAATATGCGGCGCGCTTCCTGCCGCATCTCAAGGTCGACGCCGCGGCGGCGGCGGCCGGCGTCGACGGCGCCCATTTTCTCGCCGACAGCTTCTCCCCGCAGATGCTGTCGCTCGGACGGGTGAATGGCCAGGACGTGCTGCCGCAGCTGATCGGCTCGCCCTATCTCTTCTACAACCGGGATGTGCTGTCAGCGGCCGGCATCGAGCAGGCGCCGGACACATGGCCGGCCCTGCGCACGGTCGCGCAGCGGGTCACGGCCAAGACGGGCAAGCCGTGCTTCAGCATGGCGGAGAAAGGCTATTTCTGGGCCTATCAGGGCCTGATCGAGTCCAACGGCGCCTTGCTGCTGGCGCGCGAGGGCGATCGCTACGTCACGCAGATCGACCAGCCCGGCGCGATCGAGGCCATGCAGCTGATGGCCGACATGGTGCTCGAGGACAAGTCCGCGCTGTATCTCGGCGACGCCCAGGCGGGCGTCGACTACCAGAACGGCAACCTGCCGATGATGATCGGCTTCAGCTCGCAGGTCGCCGGCGCGGTGGCCGCCGGCAAGTTCCGCGTCGGCACGGCGCCGCTCCCCGCCTGGCCGGGCAAGGCGCGCCGCATCCCGATGGCCGGCAGCGGCTTCATGGTCTTCGATGTCGGCGACGCGCCGGCCCAGGCCGCCGCCTGGCGGCTGGTCGCCTTCTTCTGCGATCCGGCCGTCCAGGCCGCCTTCACCAAGGGCACCGGCTATCCGCCGACCCGGCTCGGCGTTGCCGAGGATCCGGCCTATCTCGGCCCGTTCTACAAGGACAACCCGCTGTTCGGGCCCGACATCGCCCAGCTCGCCGTCGCCGTCCCCTGGATCAGCTTCCCCGGCCGGAACGGTCCCCAGGCCCTGCAGGTCCTCGACGAGACGCGCGACCATATCTTCAGCGGCGAGAGCGTCGCCGCCGTGATGAAGGCCGCCGCCGGCCAGATCAATGACCTCATCAATAGTTAG
PROTEIN sequence
Length: 462
MCDTSDASQSMQDAVERGEDTLPAAAGAARPGTTRRRFIGGSLAALASSELGLGRALAAATASGPATIDLWLGVGPDSAKVYRQLLDRFHAANPDITVRVNSFGEYEPLQTALQAAIAGKRPPAIAQIGFDVIQYAARFLPHLKVDAAAAAAGVDGAHFLADSFSPQMLSLGRVNGQDVLPQLIGSPYLFYNRDVLSAAGIEQAPDTWPALRTVAQRVTAKTGKPCFSMAEKGYFWAYQGLIESNGALLLAREGDRYVTQIDQPGAIEAMQLMADMVLEDKSALYLGDAQAGVDYQNGNLPMMIGFSSQVAGAVAAGKFRVGTAPLPAWPGKARRIPMAGSGFMVFDVGDAPAQAAAWRLVAFFCDPAVQAAFTKGTGYPPTRLGVAEDPAYLGPFYKDNPLFGPDIAQLAVAVPWISFPGRNGPQALQVLDETRDHIFSGESVAAVMKAAAGQINDLINS*