ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_12255_95

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(99073..99801)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI0003629197 similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 238.0
  • Bit_score: 341
  • Evalue 5.60e-91
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 240.0
  • Bit_score: 346
  • Evalue 3.80e-93
GntR family transcriptional regulator {ECO:0000313|EMBL:AHK05013.1}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens LBA4213 (Ach5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 147.0
  • Bit_score: 218
  • Evalue 5.90e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGAAGCAGCAGAAGGGGCGCCTCGTCGGCGTCATGAACGCCAGGAACCGGCCGAAGGCGAAGACGGCGGACGACGCCTATCGGCACCTGTTCTCGGCGATCGTCGACCAGCGCCTGCTGCCCGGCACCAAGCTCAGCGAGCTCGCCCTGATGGAGGCGTTCGGCTTGCCGCGGCGGGCCGTCAGCGCTGCCCTGCAGCGGCTCGCCTGGGAGAAGCTGGTGGTGACCTTCGCCAACCGGGGCGCCTATGTCGCGGCTCCCGATGCGGCGGAGGCGCGCGAGATCTTCGCCGCGCGGATCGCCATCGAGGCCGGCACGACGGAGGCGGTGGCGCGCGCCGGCGACGCGGCGGCGATCGAGGCGCTGTCGCAGAACCTCCTCCAGGAGCGGGCCCTGCGGGCGCAGGGCCGGGTGCGCGAGGCCATCCACCTCTCCGGCGGCTTCCACATGCTGATGGCGGACCTCTCGGGCAACCGCATCCTCGCCGAGCAGGTCCGTCTCCTGGTGGCGCGGACGAGCCTGATCATCAACCTGTTCGAGAACCTGACCGGGCTCGCCTGCTGGCACGAGCATCACGAGACGCTGATCCGTCATTGCGGGGAGCGGGAGGTCGAGGCCGCGGTCGCCCTCATGCGGCACCATATCGAGGAATTGCAGGACGGCCTCGCCCTCGACCGCCGGCGGCCGGTCGCCTTCGACATGCTCGGCGTGTTCGGCGAGACGGCCTGA
PROTEIN sequence
Length: 243
MKQQKGRLVGVMNARNRPKAKTADDAYRHLFSAIVDQRLLPGTKLSELALMEAFGLPRRAVSAALQRLAWEKLVVTFANRGAYVAAPDAAEAREIFAARIAIEAGTTEAVARAGDAAAIEALSQNLLQERALRAQGRVREAIHLSGGFHMLMADLSGNRILAEQVRLLVARTSLIINLFENLTGLACWHEHHETLIRHCGEREVEAAVALMRHHIEELQDGLALDRRRPVAFDMLGVFGETA*