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berkeley_reactor_200306_biofilm_scaffold_12255_96

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 99954..100988

Top 3 Functional Annotations

Value Algorithm Source
Putative periplasmic-binding protein n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X2X1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 323.0
  • Bit_score: 360
  • Evalue 9.70e-97
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 340.0
  • Bit_score: 435
  • Evalue 1.20e-119
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:AHK05015.1}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens LBA4213 (Ach5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 340.0
  • Bit_score: 435
  • Evalue 5.70e-119

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
ATGCCGCTGCCTTCGACGAGCCGCCGGACCTTCCTGCAGGCGGCGCTCGCTTCGCCCTTCGTCCTCGGCGCCGGGCTCGCCCGGGCGGCCGGGCCCCTCAAGGTCTCGCTCGCCGCGCCCTTCGACGGATCGAACGCGGCGTTCTTCCTGGCACAGAGCCGGGGCTGGTACCGGGATGCCGGGCTCGACTGCCAGTTCGACGCCTCGAACGGCTCGGGCGAGGCGGTCTCGCGCGTCGGCTCCGGCGTCTACGACCTCGGCATCGCCGACATCAACGTCATGCTCGAGTTCAACGTGAAGAACCCGGACTTCGCGGTCCGCGACGTCTACATGCTCTATTATCGCAGCCCGCTCTGCGTCGGCACGCTGGCGAAGACCGGCATCGCCAAGCCCGCCGATCTCGCCGGCCGCACCATCGGCGCGGCAGCCACCGACGGCGCCTACCGACTGTTCCCGGCCTATGCCAAGGCGGCGGGCATCGACGGCTCGGCCGTCAAATGGCAGATGGTCGGCCTGCAGCTGCGCGAGGCGGTGCTGGCGCGCGGCGACGTCGAGGCGATCCTCGGCTTCGATTCCACCATGTATTTCGGCCTGAAGAAGGCGGGTGTCGCCCCCGAGGACATCCGCTTCCTCTACTATCCCGACGCCGGCCTCGACCTCTACGGCAACGGCATCATCGTCTCCAGCAAGCTGCGCGGCCAAAGCCCCGAGGTGGTGCAGCGCTTCGTCGCCGTCACGGCGCGGGCCTGGCAGGCGTCGAGCGCCGACCCGGCGGCGGCGATCGACGCCCTGCGGCAGCACAGCCCGCTGATCAATGCCCCCCAGGAGCTGGACAAGCTGCGGTGGCTGGTCGACCACCAGCTGGTGACGCCGGAATCCCGCGCCGGCGGCCTCGGCGGCGTCGATCCGGCGCGGCTGGAGAAGGCGATCGCCACCGTGGTGGCGGCCTATGGCCTGCCGACGGCTCCCGGTGTCGGCGAGGTGTTCGACGCCACGTTCCTGCCCGGCGCCGACCTGCGCAAGGTGCCGGCATGA
PROTEIN sequence
Length: 345
MPLPSTSRRTFLQAALASPFVLGAGLARAAGPLKVSLAAPFDGSNAAFFLAQSRGWYRDAGLDCQFDASNGSGEAVSRVGSGVYDLGIADINVMLEFNVKNPDFAVRDVYMLYYRSPLCVGTLAKTGIAKPADLAGRTIGAAATDGAYRLFPAYAKAAGIDGSAVKWQMVGLQLREAVLARGDVEAILGFDSTMYFGLKKAGVAPEDIRFLYYPDAGLDLYGNGIIVSSKLRGQSPEVVQRFVAVTARAWQASSADPAAAIDALRQHSPLINAPQELDKLRWLVDHQLVTPESRAGGLGGVDPARLEKAIATVVAAYGLPTAPGVGEVFDATFLPGADLRKVPA*